Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq5432 161 3e-35 seq5910 113 1e-20 >seq5432 Length=1936 Score = 161 bits (178), Expect = 3e-35 Identities = 223/307 (73%), Gaps = 25/307 (8%) Strand=Plus/Plus Query 23416 CGACCACCAAGCAGCAGAAGTTCGCCTCTGAAGCTGTCCACCACAATTTCGGTGGTGTAG 23475 |||||||| |||||| | | ||| ||| | |||| || | || ||||||||||| Sbjct 153 CGACCACCCAGCAGCTGCATGGTGCC-CTGCA--TGTCGACGATGATCTCGGTGGTGTAA 209 Query 23476 ---TTGGTCGCGCCGTCTTTTTCCCACTTGCGTGTCTGCAGCTTGCCGATGATCGCGCAT 23532 ||| | |||||| |||||||||| ||| |||||||||||||| ||| | Sbjct 210 CGCTTGAT---GCCGTCCTTTTCCCACTCGCGGGTCTGCAGCTTGCCCTCGATG-----T 261 Query 23533 TCACTT-----CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACA 23587 ||| | ||||||||||| |||||||||||||||||||| ||||||||||| | | Sbjct 262 ACACCTGCGAACCCTTGCGCAGGTACTCGCCGGCAATCTCGGCAACCTTGCCGAACATCG 321 Query 23588 CGACGCGGTGCCATTCGGT---CTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGG 23644 || |||||||| ||||| || |||| || ||||||||||||||| |||| Sbjct 322 AAACACGGTGCCACTCGGTACGCTCGACCTT---CTGGCCGGTCTGCTTGTCGGTCCACT 378 Query 23645 TTTCCGACGTGGCCAGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTT 23704 || ||||||||||||| |||| || || | |||||| |||||| ||| |||| Sbjct 379 GCTCGCTGGTGGCCAGGCTGAGGTTGGTCACCGCGTTGCCGTTGGGCAGGTGGCGAACTT 438 Query 23705 CCGGGTC 23711 | ||||| Sbjct 439 CAGGGTC 445 >seq5910 Length=978 Score = 113 bits (124), Expect = 1e-20 Identities = 123/161 (76%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 15118 CGGCATCACTGGCACCAGCCGGCCTATCGACTTCA-CGCTGGGCGATTCCAGCTCGCGCG 15176 |||||| || ||||||| ||| || ||||| ||| || ||| ||| | || |||| Sbjct 334 CGGCATTACCGGCACCACCCGCCCCATCGAGTTCCTCGATGG-CGACGAGACCTGCCGCG 392 Query 15177 CCAACCTGCTGAACGAAGCAAAGGTGGCGACCATCATTCGCGAGGACGGTTTCCGCCTGT 15236 |||||||||| ||| | || || | | |||||||| ||||| ||||| | ||||||| Sbjct 393 CCAACCTGCTCAACAACGCCAACATCACCACCATCATCCGCGATGACGGCTATCGCCTGT 452 Query 15237 GGGGCAACCGCACCCTGTCGAGCGATCAAAAGTGGGCGTTC 15277 ||||||||||||||||| ||||| | |||||||| ||| Sbjct 453 GGGGCAACCGCACCCTGAGCAGCGACCCGAAGTGGGCCTTC 493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139270778550120