Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_023006.1
Length=43564
Score E
Sequences producing significant alignments: (Bits) Value
seq5432 161 3e-35
seq5910 113 1e-20
>seq5432
Length=1936
Score = 161 bits (178), Expect = 3e-35
Identities = 223/307 (73%), Gaps = 25/307 (8%)
Strand=Plus/Plus
Query 23416 CGACCACCAAGCAGCAGAAGTTCGCCTCTGAAGCTGTCCACCACAATTTCGGTGGTGTAG 23475
|||||||| |||||| | | ||| ||| | |||| || | || |||||||||||
Sbjct 153 CGACCACCCAGCAGCTGCATGGTGCC-CTGCA--TGTCGACGATGATCTCGGTGGTGTAA 209
Query 23476 ---TTGGTCGCGCCGTCTTTTTCCCACTTGCGTGTCTGCAGCTTGCCGATGATCGCGCAT 23532
||| | |||||| |||||||||| ||| |||||||||||||| ||| |
Sbjct 210 CGCTTGAT---GCCGTCCTTTTCCCACTCGCGGGTCTGCAGCTTGCCCTCGATG-----T 261
Query 23533 TCACTT-----CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACA 23587
||| | ||||||||||| |||||||||||||||||||| ||||||||||| | |
Sbjct 262 ACACCTGCGAACCCTTGCGCAGGTACTCGCCGGCAATCTCGGCAACCTTGCCGAACATCG 321
Query 23588 CGACGCGGTGCCATTCGGT---CTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGG 23644
|| |||||||| ||||| || |||| || ||||||||||||||| ||||
Sbjct 322 AAACACGGTGCCACTCGGTACGCTCGACCTT---CTGGCCGGTCTGCTTGTCGGTCCACT 378
Query 23645 TTTCCGACGTGGCCAGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTT 23704
|| ||||||||||||| |||| || || | |||||| |||||| ||| ||||
Sbjct 379 GCTCGCTGGTGGCCAGGCTGAGGTTGGTCACCGCGTTGCCGTTGGGCAGGTGGCGAACTT 438
Query 23705 CCGGGTC 23711
| |||||
Sbjct 439 CAGGGTC 445
>seq5910
Length=978
Score = 113 bits (124), Expect = 1e-20
Identities = 123/161 (76%), Gaps = 2/161 (1%)
Strand=Plus/Plus
Query 15118 CGGCATCACTGGCACCAGCCGGCCTATCGACTTCA-CGCTGGGCGATTCCAGCTCGCGCG 15176
|||||| || ||||||| ||| || ||||| ||| || ||| ||| | || ||||
Sbjct 334 CGGCATTACCGGCACCACCCGCCCCATCGAGTTCCTCGATGG-CGACGAGACCTGCCGCG 392
Query 15177 CCAACCTGCTGAACGAAGCAAAGGTGGCGACCATCATTCGCGAGGACGGTTTCCGCCTGT 15236
|||||||||| ||| | || || | | |||||||| ||||| ||||| | |||||||
Sbjct 393 CCAACCTGCTCAACAACGCCAACATCACCACCATCATCCGCGATGACGGCTATCGCCTGT 452
Query 15237 GGGGCAACCGCACCCTGTCGAGCGATCAAAAGTGGGCGTTC 15277
||||||||||||||||| ||||| | |||||||| |||
Sbjct 453 GGGGCAACCGCACCCTGAGCAGCGACCCGAAGTGGGCCTTC 493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139270778550120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |