Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_023557.1
Length=271084
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 508 1e-138
>seq2257
Length=8409
Score = 508 bits (562), Expect = 1e-138
Identities = 782/1104 (71%), Gaps = 30/1104 (3%)
Strand=Plus/Plus
Query 71269 TACAGTACCTTTAATACCACTAAAAACGATCAGATGGCTGAACCGATGTTCCTGGGTCAG 71328
|| ||||| ||| || || | ||||| ||| | ||||| |||||| | || |||
Sbjct 7165 TATAGTACTTTTTCTAAAACGGATAACGACCAGCTCAAAGAACCCATGTTCTTTGGGCAG 7224
Query 71329 TCGGTTAACGTCTCACGTTATGATCAGCAGAAGTACCCCGCGTTCGAAAAGCTGATTGAG 71388
|||||||||| | || || || ||||| || || || || ||||||||||||||
Sbjct 7225 CCGGTTAACGTGGCTCGCTACGACCAGCAAAAATATCCGATTTTTGAAAAGCTGATTGAA 7284
Query 71389 AAACAACTTTCATTCTTCTGGCGACCTGAAGAGGTGGATGTTTCGCAAGACCGTATCGAC 71448
|| || | || ||||||||||| || || || ||||| || | || ||||| ||||||
Sbjct 7285 AAGCAGTTGTCCTTCTTCTGGCGTCCGGAGGAAGTGGACATTACCCAGGACCGGATCGAC 7344
Query 71449 TTCCAGGGGTTGCCAGATCATGAAAAACACATCTTCGTTTCTAACCTGAAATACCAAACC 71508
| ||| |||| || || ||||| ||||| ||| | || ||||| || || |||
Sbjct 7345 TATCAGAACCTGCCTGACCACGAAAAGCACATTTTCATCAGCAATCTGAAGTATCAGACC 7404
Query 71509 CTGCTGGACTCGATTCAGGGTCGTAGCCCGAACGTGGCCTTGCTGCCGATCTGTTCTATC 71568
||||||| || || ||||| || ||||| ||||||||||| ||||| | || ||
Sbjct 7405 TTGCTGGATTCCATCCAGGGCCGCAGCCCCAACGTGGCCTTCCTGCCTTTGGTATCGATT 7464
Query 71569 CCGGAACTCGAAACCTGGATTGAAACCTGGGCGTTCTCTGAAACGATTCACTCGCGCTCA 71628
||||| || ||||||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct 7465 CCGGAGCTGGAAACCTGGATTGAAACCTGGGCTTTCTCCGAGACGATTCACTCGCGCTCG 7524
Query 71629 TACACCCACATCATCCGTAATATCTTTACTGACCCCTCCATCGTGTTTGATGACATCGTG 71688
||||| |||||||| || ||||| | |||||| ||| | | ||||| |||||||||
Sbjct 7525 TACACGCACATCATTCGCAATATTGCCAATGACCCGTCCGTTATTTTTGACGACATCGTG 7584
Query 71689 ACCAACGAACACATCAAAGCGCGTGCTGAGTCCGTCA---CGGAGTATTACGACCAGCTG 71745
|||||| |||| | |||||| | ||| || | ||| |||||| | |||
Sbjct 7585 CGCAACGAGAACATTCAGCTGCGTGCCG---CCGACATTTCCTCGTACTACGACGATCTG 7641
Query 71746 AT---CGAAATGACCATGTACCTCAACTTACTGGGTGAAGGTACTCATGTAATCAATGGT 71802
|| ||| | | ||||| | | ||||||| ||| || | |||||| |||
Sbjct 7642 ATCAGCGACACCATGCTGTACGCCCA---GCTGGGTGCAGGCGAACACGAAATCAACGGT 7698
Query 71803 AAGAAAGTCGTGGTCTCGATGCGTGCTA-----TCAAGCGTCTGGTCTACCTGTGCATCG 71857
|||| ||| | | | |||| ||| | ||| | | |||||||||||
Sbjct 7699 --GAAACCCGT--ACGCTAAGCGT-CTACGAGCTGAAGAAGAAGCTGTACCTGTGCATGA 7753
Query 71858 TGTCGGTCAACGTGTTGGAAGCCATCCGCTTCTATGTCTCGTTTGCCTGCTCGTTTGCCT 71917
|| ||||| | | || ||||||||||| || ||| ||||||||||| || ||||
Sbjct 7754 TGAGCGTCAATATTCTTGAGGCCATCCGCTTTTACGTCAGCTTTGCCTGCTCCTTCGCCT 7813
Query 71918 TTGCTGAACGCGAGCTGATGGAAGGCAACGCCAAGATCATTAAACTGATCGCCCGTGATG 71977
|||| || ||| |||||||||||||||| |||||||||||| |||| || |||||||
Sbjct 7814 TTGCCGAGCGCAAGCTGATGGAAGGCAATGCCAAGATCATTCGCTTGATTGCGCGTGATG 7873
Query 71978 AAGCCCTGCATCTGACCGGCACCCAGCACATGATCATGTTAATGAAGTCCGGTGCTGACG 72037
|||| ||||||||||| ||||| || ||||| |||| | || ||||| ||||
Sbjct 7874 AAGCGCTGCATCTGACTGGCACGCAACACATCATCAATATTCTGCGTTCCGGCAGCGACG 7933
Query 72038 ATGCTGAGATGGCGGAAATCGTTAAAGAGTGTGAAGCAG--AAACATACGCACTCTTTAA 72095
| ||||| | || | |||| || || ||| | | | || | || ||
Sbjct 7934 ACCCTGAGTTCGCTCAGATCGCGCGCGA-ACTGGAGCCGGTCTGCTTTGACA-TGTTCAA 7991
Query 72096 GGACGCTGCAGAGCAGGAGAAAGACTGGGCGAACTATCTATTCCAGGACGGGTCGATGAT 72155
||| || || |||||||| ||| | |||||| | || || |||| ||||| || |||||
Sbjct 7992 GGATGCGGCCGAGCAGGAAAAACAGTGGGCGGATTACCTGTTCCGCGACGGTTCCATGAT 8051
Query 72156 CGGTCTGAACAAAGAGATCGTGTGCCAGTACATCGAATACATCACCAACATCCGTATTCG 72215
|| |||||||| || || || | |||||| | || ||||||||||| |||||||| |
Sbjct 8052 TGGCCTGAACAAGGACATTCTGGGTCAGTACGTGGAGTACATCACCAATATCCGTATGGG 8111
Query 72216 CGCCATCGG--TTACGATGACATCTACGCCGGTGTCAAAGCTAACCCAATCCCATGGATC 72273
|| | || | | | | | | | | ||||||| ||||| || |||||||||
Sbjct 8112 TGCAGTGGGCCTGAAGCCTGCGTTTGAGTC--TGTCAAACACAACCCCATTCCATGGATC 8169
Query 72274 AACTCCTGGTTGGTTTCTGACAACGTGCAAGTCGCTCCACAGGAAGTGGAAGTAAGTTCT 72333
||| |||||||| || |||| ||| || || || || || || |||||| | || |||
Sbjct 8170 AACACCTGGTTGTCCTCGGACACCGTACAGGTGGCACCTCAAGAGGTGGAACTGAGCTCT 8229
Query 72334 TATCTGGTCGGTCAGATAGACTCG 72357
|| |||||||||||||| || |||
Sbjct 8230 TACCTGGTCGGTCAGATCGATTCG 8253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 867259378382400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |