Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq2257 508 1e-138 >seq2257 Length=8409 Score = 508 bits (562), Expect = 1e-138 Identities = 782/1104 (71%), Gaps = 30/1104 (3%) Strand=Plus/Plus Query 71269 TACAGTACCTTTAATACCACTAAAAACGATCAGATGGCTGAACCGATGTTCCTGGGTCAG 71328 || ||||| ||| || || | ||||| ||| | ||||| |||||| | || ||| Sbjct 7165 TATAGTACTTTTTCTAAAACGGATAACGACCAGCTCAAAGAACCCATGTTCTTTGGGCAG 7224 Query 71329 TCGGTTAACGTCTCACGTTATGATCAGCAGAAGTACCCCGCGTTCGAAAAGCTGATTGAG 71388 |||||||||| | || || || ||||| || || || || |||||||||||||| Sbjct 7225 CCGGTTAACGTGGCTCGCTACGACCAGCAAAAATATCCGATTTTTGAAAAGCTGATTGAA 7284 Query 71389 AAACAACTTTCATTCTTCTGGCGACCTGAAGAGGTGGATGTTTCGCAAGACCGTATCGAC 71448 || || | || ||||||||||| || || || ||||| || | || ||||| |||||| Sbjct 7285 AAGCAGTTGTCCTTCTTCTGGCGTCCGGAGGAAGTGGACATTACCCAGGACCGGATCGAC 7344 Query 71449 TTCCAGGGGTTGCCAGATCATGAAAAACACATCTTCGTTTCTAACCTGAAATACCAAACC 71508 | ||| |||| || || ||||| ||||| ||| | || ||||| || || ||| Sbjct 7345 TATCAGAACCTGCCTGACCACGAAAAGCACATTTTCATCAGCAATCTGAAGTATCAGACC 7404 Query 71509 CTGCTGGACTCGATTCAGGGTCGTAGCCCGAACGTGGCCTTGCTGCCGATCTGTTCTATC 71568 ||||||| || || ||||| || ||||| ||||||||||| ||||| | || || Sbjct 7405 TTGCTGGATTCCATCCAGGGCCGCAGCCCCAACGTGGCCTTCCTGCCTTTGGTATCGATT 7464 Query 71569 CCGGAACTCGAAACCTGGATTGAAACCTGGGCGTTCTCTGAAACGATTCACTCGCGCTCA 71628 ||||| || ||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 7465 CCGGAGCTGGAAACCTGGATTGAAACCTGGGCTTTCTCCGAGACGATTCACTCGCGCTCG 7524 Query 71629 TACACCCACATCATCCGTAATATCTTTACTGACCCCTCCATCGTGTTTGATGACATCGTG 71688 ||||| |||||||| || ||||| | |||||| ||| | | ||||| ||||||||| Sbjct 7525 TACACGCACATCATTCGCAATATTGCCAATGACCCGTCCGTTATTTTTGACGACATCGTG 7584 Query 71689 ACCAACGAACACATCAAAGCGCGTGCTGAGTCCGTCA---CGGAGTATTACGACCAGCTG 71745 |||||| |||| | |||||| | ||| || | ||| |||||| | ||| Sbjct 7585 CGCAACGAGAACATTCAGCTGCGTGCCG---CCGACATTTCCTCGTACTACGACGATCTG 7641 Query 71746 AT---CGAAATGACCATGTACCTCAACTTACTGGGTGAAGGTACTCATGTAATCAATGGT 71802 || ||| | | ||||| | | ||||||| ||| || | |||||| ||| Sbjct 7642 ATCAGCGACACCATGCTGTACGCCCA---GCTGGGTGCAGGCGAACACGAAATCAACGGT 7698 Query 71803 AAGAAAGTCGTGGTCTCGATGCGTGCTA-----TCAAGCGTCTGGTCTACCTGTGCATCG 71857 |||| ||| | | | |||| ||| | ||| | | ||||||||||| Sbjct 7699 --GAAACCCGT--ACGCTAAGCGT-CTACGAGCTGAAGAAGAAGCTGTACCTGTGCATGA 7753 Query 71858 TGTCGGTCAACGTGTTGGAAGCCATCCGCTTCTATGTCTCGTTTGCCTGCTCGTTTGCCT 71917 || ||||| | | || ||||||||||| || ||| ||||||||||| || |||| Sbjct 7754 TGAGCGTCAATATTCTTGAGGCCATCCGCTTTTACGTCAGCTTTGCCTGCTCCTTCGCCT 7813 Query 71918 TTGCTGAACGCGAGCTGATGGAAGGCAACGCCAAGATCATTAAACTGATCGCCCGTGATG 71977 |||| || ||| |||||||||||||||| |||||||||||| |||| || ||||||| Sbjct 7814 TTGCCGAGCGCAAGCTGATGGAAGGCAATGCCAAGATCATTCGCTTGATTGCGCGTGATG 7873 Query 71978 AAGCCCTGCATCTGACCGGCACCCAGCACATGATCATGTTAATGAAGTCCGGTGCTGACG 72037 |||| ||||||||||| ||||| || ||||| |||| | || ||||| |||| Sbjct 7874 AAGCGCTGCATCTGACTGGCACGCAACACATCATCAATATTCTGCGTTCCGGCAGCGACG 7933 Query 72038 ATGCTGAGATGGCGGAAATCGTTAAAGAGTGTGAAGCAG--AAACATACGCACTCTTTAA 72095 | ||||| | || | |||| || || ||| | | | || | || || Sbjct 7934 ACCCTGAGTTCGCTCAGATCGCGCGCGA-ACTGGAGCCGGTCTGCTTTGACA-TGTTCAA 7991 Query 72096 GGACGCTGCAGAGCAGGAGAAAGACTGGGCGAACTATCTATTCCAGGACGGGTCGATGAT 72155 ||| || || |||||||| ||| | |||||| | || || |||| ||||| || ||||| Sbjct 7992 GGATGCGGCCGAGCAGGAAAAACAGTGGGCGGATTACCTGTTCCGCGACGGTTCCATGAT 8051 Query 72156 CGGTCTGAACAAAGAGATCGTGTGCCAGTACATCGAATACATCACCAACATCCGTATTCG 72215 || |||||||| || || || | |||||| | || ||||||||||| |||||||| | Sbjct 8052 TGGCCTGAACAAGGACATTCTGGGTCAGTACGTGGAGTACATCACCAATATCCGTATGGG 8111 Query 72216 CGCCATCGG--TTACGATGACATCTACGCCGGTGTCAAAGCTAACCCAATCCCATGGATC 72273 || | || | | | | | | | | ||||||| ||||| || ||||||||| Sbjct 8112 TGCAGTGGGCCTGAAGCCTGCGTTTGAGTC--TGTCAAACACAACCCCATTCCATGGATC 8169 Query 72274 AACTCCTGGTTGGTTTCTGACAACGTGCAAGTCGCTCCACAGGAAGTGGAAGTAAGTTCT 72333 ||| |||||||| || |||| ||| || || || || || || |||||| | || ||| Sbjct 8170 AACACCTGGTTGTCCTCGGACACCGTACAGGTGGCACCTCAAGAGGTGGAACTGAGCTCT 8229 Query 72334 TATCTGGTCGGTCAGATAGACTCG 72357 || |||||||||||||| || ||| Sbjct 8230 TACCTGGTCGGTCAGATCGATTCG 8253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 867259378382400