Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_023568.1
Length=246964
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 147 3e-30
>seq2257
Length=8409
Score = 147 bits (162), Expect = 3e-30
Identities = 288/420 (69%), Gaps = 8/420 (2%)
Strand=Plus/Plus
Query 78656 TTTCATTACCGACACCGATTATGGCAGGCGTTCGTACCCCGACACGCCAGTTTAGTTCGT 78715
|||| || || || || || ||||| ||||| || || || || |||||||| || || |
Sbjct 5477 TTTCCTTGCCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCTT 5536
Query 78716 GTGTTAAGATTGAATCAGGCGACTCTTTGCATTCAATCAATGAAGTGGCTAAATCAATTG 78775
| || ||| |||| | |||| || | ||||||| | | | | ||||
Sbjct 5537 GCGTGCTGATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATTG 5596
Query 78776 TAAGTTACATTAGTAAGCGTGCAGGTATCGGTGTTAACGGCGGTGCGATTCGTGCTGAAG 78835
| ||||| | ||||||| ||||||||| | || || || ||||| || | ||
Sbjct 5597 TTCGTTACGTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAG 5656
Query 78836 GGGCAGTCG---TTCGTTCAGGTGAGATTCGTCACACTGGTGTAATTCCATTCTGGAAAC 78892
| ||| || ||||| ||||| | ||||| ||| | || |||| ||
Sbjct 5657 G--CAG-CGAAATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAGA 5713
Query 78893 ACTTTCAAACTGCGGTTAAATCGTGTTCTCAAGGTGGTGTACGTGGGGGTGCTGCGACTC 78952
|| || ||||||| || || || || ||||| || || ||||| ||||| || ||
Sbjct 5714 TGTTCCAGGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCT 5773
Query 78953 TAACTTACCCGATTTGGCACTTAGAAGTTGAAAAACTGTTAGTTCTGAAGAACAACAAAG 79012
| ||||| || |||||| | ||||| |||| |||| | ||||||||||||||| |
Sbjct 5774 TGTTCTACCCCATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTG 5833
Query 79013 GTGTTGAAGAAAACCGTATTCGTCATCTTGACTACAGTGTATCA-ATCAGTCGATTGATG 79071
|||| |||||||||||||||||||| | |||||| |||| ||| |||| || ||| ||
Sbjct 5834 GTGTGGAAGAAAACCGTATTCGTCACTTGGACTACGGTGT-TCAGATCAACCGCTTGCTG 5892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 790082624030400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |