Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_023568.1 Length=246964 Score E Sequences producing significant alignments: (Bits) Value seq2257 147 3e-30 >seq2257 Length=8409 Score = 147 bits (162), Expect = 3e-30 Identities = 288/420 (69%), Gaps = 8/420 (2%) Strand=Plus/Plus Query 78656 TTTCATTACCGACACCGATTATGGCAGGCGTTCGTACCCCGACACGCCAGTTTAGTTCGT 78715 |||| || || || || || ||||| ||||| || || || || |||||||| || || | Sbjct 5477 TTTCCTTGCCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCTT 5536 Query 78716 GTGTTAAGATTGAATCAGGCGACTCTTTGCATTCAATCAATGAAGTGGCTAAATCAATTG 78775 | || ||| |||| | |||| || | ||||||| | | | | |||| Sbjct 5537 GCGTGCTGATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATTG 5596 Query 78776 TAAGTTACATTAGTAAGCGTGCAGGTATCGGTGTTAACGGCGGTGCGATTCGTGCTGAAG 78835 | ||||| | ||||||| ||||||||| | || || || ||||| || | || Sbjct 5597 TTCGTTACGTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAG 5656 Query 78836 GGGCAGTCG---TTCGTTCAGGTGAGATTCGTCACACTGGTGTAATTCCATTCTGGAAAC 78892 | ||| || ||||| ||||| | ||||| ||| | || |||| || Sbjct 5657 G--CAG-CGAAATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAGA 5713 Query 78893 ACTTTCAAACTGCGGTTAAATCGTGTTCTCAAGGTGGTGTACGTGGGGGTGCTGCGACTC 78952 || || ||||||| || || || || ||||| || || ||||| ||||| || || Sbjct 5714 TGTTCCAGGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCT 5773 Query 78953 TAACTTACCCGATTTGGCACTTAGAAGTTGAAAAACTGTTAGTTCTGAAGAACAACAAAG 79012 | ||||| || |||||| | ||||| |||| |||| | ||||||||||||||| | Sbjct 5774 TGTTCTACCCCATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTG 5833 Query 79013 GTGTTGAAGAAAACCGTATTCGTCATCTTGACTACAGTGTATCA-ATCAGTCGATTGATG 79071 |||| |||||||||||||||||||| | |||||| |||| ||| |||| || ||| || Sbjct 5834 GTGTGGAAGAAAACCGTATTCGTCACTTGGACTACGGTGT-TCAGATCAACCGCTTGCTG 5892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 790082624030400