Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq5432 188 2e-43 >seq5432 Length=1936 Score = 188 bits (208), Expect = 2e-43 Identities = 248/336 (74%), Gaps = 11/336 (3%) Strand=Plus/Plus Query 30056 CCGCCAAACATCTGCATC-TGCCCGTGCATGTCGACGATGATCTCTGTTGTGTAGCGGTC 30114 || || | || |||||| ||||| |||||||||||||||||||| || ||||| || | Sbjct 156 CCACCCAGCAGCTGCATGGTGCCC-TGCATGTCGACGATGATCTCGGTGGTGTAACGCT- 213 Query 30115 CTGA--CCGTCCTGCGCCTGCCACTTTCGAGTTCTG-AGTGAACCCTCGACGTACAGTTG 30171 ||| ||||||| || |||| || || ||| || ||||||| ||||| || Sbjct 214 -TGATGCCGTCCTTTTCC---CACTCGCGGGT-CTGCAGCTTGCCCTCGATGTACACCTG 268 Query 30172 CTGACCCTTCTTTACGTGCTGCCCGACGATCTCCGCCAACTTCCCGAAGAACACCACGCG 30231 | |||||| | || || ||| | ||||| || | ||| ||||| | | || || Sbjct 269 CGAACCCTTGCGCAGGTACTCGCCGGCAATCTCGGCAACCTTGCCGAACATCGAAACACG 328 Query 30232 GTGCCATTCGGTGCGCTCCTGTTGCTGGCCGGTCTGCTTGTCCTTCCAGCTCTCGCTGGT 30291 |||||| ||||| ||||| | |||||||||||||||||| |||| ||||||||| Sbjct 329 GTGCCACTCGGTACGCTCGACCTTCTGGCCGGTCTGCTTGTCGGTCCACTGCTCGCTGGT 388 Query 30292 GGCGAGGGTGATGTTGGTCACCGCATTGCCGTTGGGCATATAGCGAGTTTCCGGGTCACC 30351 ||| ||| ||| |||||||||||| ||||||||||||| | |||| ||| ||||| Sbjct 389 GGCCAGGCTGAGGTTGGTCACCGCGTTGCCGTTGGGCAGGTGGCGAACTTCAGGGTCCTG 448 Query 30352 ACCGACGTTGCCAACCAGAATGACTTTGTTAACGCC 30387 ||| |||| |||| ||||||||||||||| || Sbjct 449 GCCGCAAGTGCCGACCAAAATGACTTTGTTAACCCC 484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145625411785440