Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_023581.1
Length=77792
Score E
Sequences producing significant alignments: (Bits) Value
seq2290 86.0 3e-12
>seq2290
Length=1989
Score = 86.0 bits (94), Expect = 3e-12
Identities = 153/221 (69%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 37926 TGCCACCTTGTCATACATTGTTCCAGTTCTTTGTAGAGAATGGAAAACTAAGCTGTCAGT 37985
|||| ||||| || | |||||||||||| ||||| |||| || || ||| |||
Sbjct 1044 TGCCCCCTTGCCACGCCCTGTTCCAGTTCTATGTAGCCGATGGCAAGCTGTCCTGCCAGC 985
Query 37986 TATATCAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTATGCGT 38045
| || || || ||||| ||| | ||| | ||||| || || ||||| || ||||| ||
Sbjct 984 TCTACCAGCGCAGTGCGGATATTTTCCTGGGTGTGCCCTTCAATATCGCCAGCTACGCTC 925
Query 38046 TGCTTACACATATCGTAGCTGCAG-AATGTGGATTAGAAGTTGGTGAATTTGTCTGGACT 38104
|||| || || || | || ||| |||||| | ||||| || || || | |||||
Sbjct 924 TGCTGACCCACATGATGGC-CCAGCAATGTGATCTGGAAGTGGGCGACTTCATTTGGACG 866
Query 38105 GGTGGTGTAGTTCACCTGTACAGTAATCACCTTGAGCAAGC 38145
|| || | |||||||| || ||| | ||||||||
Sbjct 865 GGCGGCGACTGCCACCTGTATTCCAACCACTTCGAGCAAGC 825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 248786826923830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |