Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_023688.1
Length=222006
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 167 3e-36
>seq2257
Length=8409
Score = 167 bits (184), Expect = 3e-36
Identities = 278/400 (70%), Gaps = 4/400 (1%)
Strand=Plus/Minus
Query 32815 TTGATTTGGATACCGTAGTCCAAGTGTCTGATTCGATTTTCTTCCACACCCTTGTTGTTC 32874
||||| || | ||||||||||||||| | || || |||||||||||||| |||||||
Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823
Query 32875 TTGAGCACAAGGATTTTTTCAACTTCAAGATGCCACATCGGATAATACAGAGTAGCAGCG 32934
|| || || || | | |||| ||||| || |||||||| || || ||| || || ||
Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763
Query 32935 CCACCACGTACACCGCCCTGTGAGCAGCTTTTTACCGCAGTCTGAAAGTATTTCCAGAAT 32994
|||||||| || ||||| || |||||| || ||||||| ||| || || ||||
Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703
Query 32995 GGGATAATACCAGTATGACGAACCTCGCCAGAACGAATTCTAGAGCCTTCAGCACGAATA 33054
|| | ||| || || | | || ||| ||||||| |||| | || |||||
Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATG 5643
Query 33055 GCACCACCATTGATACCGATACCAGCTCTCTTGCTGATA--TAGTCAACGATAGAACTAG 33112
|||||||||||||||||||| || | || ||| | || ||| || | || |
Sbjct 5642 CGGCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATGGCGCTGG 5585
Query 33113 CGGTTGCGTTAATGCTATCGAGTTCATCACCACTTTCAATCTTGACGCATGAGCTAAACT 33172
|| || || ||||| || || || ||| ||| ||| ||||| ||||| ||||
Sbjct 5584 TCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACT 5525
Query 33173 GACGGGTCGGAGTACGAACACCAGCCAGAATAGGAGTCGG 33212
| || || || || || || ||||||| || || || ||
Sbjct 5524 GGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGG 5485
Score = 84.2 bits (92), Expect = 3e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 30825 TTCGTCGCGAGCGATCAAGCGCATGATCTTGGCGTTACCTTCCATCAAACCACGCTCACC 30884
||| || || || |||||||| ||||||||||| || |||||||||| ||||| |
Sbjct 7875 TTCATCACGCGCAATCAAGCGAATGATCTTGGCATTGCCTTCCATCAGCTTGCGCTCGGC 7816
Query 30885 AAATGAGAATGTGCAAGCAAAGCTAACATAGAAACGCATTGCCTCAAGA 30933
||| | ||| | ||| |||||||| || || || || || |||||||||
Sbjct 7815 AAAGGCGAAGGAGCAGGCAAAGCTGACGTAAAAGCGGATGGCCTCAAGA 7767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 710224521413600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |