Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_023856.1
Length=152460
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 107 2e-18
>seq2257
Length=8409
Score = 107 bits (118), Expect = 2e-18
Identities = 283/426 (66%), Gaps = 12/426 (3%)
Strand=Plus/Plus
Query 31482 CCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTTCTT 31541
|| || ||||||||| | ||||| || || || || ||||| ||||| ||||| || ||
Sbjct 5485 CCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCTTGCGTGCTG 5544
Query 31542 ATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGATTAT 31601
||| || | |||| ||||| |||||||| || ||| |||||| |||
Sbjct 5545 ATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATTGTTCGTTAC 5604
Query 31602 GTATCCAAACGCGCTGGGATCGGATTTGATGTTGGAGCAATTCGTGGCATCGGTAGCCCT 31661
|| || | || || || ||||| | ||| ||| ||||| | | | || |||
Sbjct 5605 GTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGCAGCGAA 5664
Query 31662 ATCCGAAAAGGTGAAATGGTGCACACAGG---CCTG--GTTCCTTTCATAAAATATCTGA 31716
|| || |||||| ||||| || |||| |||| |||| | | | |
Sbjct 5665 ATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTC--TTCAAGATGTTCCAGG 5722
Query 31717 CTGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGCAAC-TTGCTAT 31775
||| || | ||||| ||||| |||||||| | ||||| || | ||||| ||| | |
Sbjct 5723 CTGCGG---TGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTCT 5779
Query 31776 ATCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTCTT 31835
| ||| || ||||| || | || | |||| |||||||||||||||||| |
Sbjct 5780 ACCCC-ATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTGGTGTG 5838
Query 31836 GAAGAGAACCGTGAACGCCGTATCGACTATGGTATTCAGATCAACCGCGTCATGTTCGAA 31895
||||| |||||| || | | ||||| ||| |||||||||||||| | ||| | |
Sbjct 5839 GAAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCTGTACCAG 5898
Query 31896 CGTCTG 31901
|| |||
Sbjct 5899 CGCCTG 5904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 487698213032000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |