Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_023856.1 Length=152460 Score E Sequences producing significant alignments: (Bits) Value seq2257 107 2e-18 >seq2257 Length=8409 Score = 107 bits (118), Expect = 2e-18 Identities = 283/426 (66%), Gaps = 12/426 (3%) Strand=Plus/Plus Query 31482 CCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTTCTT 31541 || || ||||||||| | ||||| || || || || ||||| ||||| ||||| || || Sbjct 5485 CCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCTTGCGTGCTG 5544 Query 31542 ATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGATTAT 31601 ||| || | |||| ||||| |||||||| || ||| |||||| ||| Sbjct 5545 ATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATTGTTCGTTAC 5604 Query 31602 GTATCCAAACGCGCTGGGATCGGATTTGATGTTGGAGCAATTCGTGGCATCGGTAGCCCT 31661 || || | || || || ||||| | ||| ||| ||||| | | | || ||| Sbjct 5605 GTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGCAGCGAA 5664 Query 31662 ATCCGAAAAGGTGAAATGGTGCACACAGG---CCTG--GTTCCTTTCATAAAATATCTGA 31716 || || |||||| ||||| || |||| |||| |||| | | | | Sbjct 5665 ATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTC--TTCAAGATGTTCCAGG 5722 Query 31717 CTGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGCAAC-TTGCTAT 31775 ||| || | ||||| ||||| |||||||| | ||||| || | ||||| ||| | | Sbjct 5723 CTGCGG---TGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTCT 5779 Query 31776 ATCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTCTT 31835 | ||| || ||||| || | || | |||| |||||||||||||||||| | Sbjct 5780 ACCCC-ATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTGGTGTG 5838 Query 31836 GAAGAGAACCGTGAACGCCGTATCGACTATGGTATTCAGATCAACCGCGTCATGTTCGAA 31895 ||||| |||||| || | | ||||| ||| |||||||||||||| | ||| | | Sbjct 5839 GAAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCTGTACCAG 5898 Query 31896 CGTCTG 31901 || ||| Sbjct 5899 CGCCTG 5904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487698213032000