Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_024121.1 Length=167266 Score E Sequences producing significant alignments: (Bits) Value seq2257 201 1e-46 >seq2257 Length=8409 Score = 201 bits (222), Expect = 1e-46 Identities = 291/408 (71%), Gaps = 2/408 (0%) Strand=Plus/Minus Query 139718 GTTGATTTGCACACCGTAATCCAAGTGACGAATGCGGTTCTCTTCAACGCCTTTGTTGTT 139777 |||||| || |||||||| |||||||||||||| ||||| ||||| || || |||||| Sbjct 5883 GTTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTT 5824 Query 139778 TTTCAGAACAAGCAAGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAACGTCGCTGC 139837 |||||||| |||| |||| ||||||| |||||| || || ||| |||| || || || Sbjct 5823 CTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGC 5764 Query 139838 ACCACCACGAACACCACCTTGAGAACAGGATTTAACCGCAGTCTGGAAGTGTTTCCAGAA 139897 ||||||||| || || ||||| || ||||| || ||||||| |||||| || |||| Sbjct 5763 ACCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAA 5704 Query 139898 AGGAATTACGCCAGTGTGTTTGACTTCACCGAAACCAATTTTTGAGCCTTCAGCTCGGAT 139957 || | || ||||||| ||||||| || ||||| |||| | || || || Sbjct 5703 CGGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAAT 5644 Query 139958 TCGACCTGCGTTGATGCCGATTCCAGCTCGTTTAGAAATGTACTTGACAATCGATGCTGC 140017 || || | ||||| ||||| || || || | || | ||| ||||| | |||| Sbjct 5643 GCGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAAT-GGCGCTGG 5585 Query 140018 T-GAGTCGTTGATACTGTTAAGCGAATCATCAGACTCGATAACAACACACGAACTGAATT 140076 | | | | ||||| |||| || || ||| | ||||| | || || || ||||| | Sbjct 5584 TCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACT 5525 Query 140077 GACGAATCGGTGTACGGGCTCCTGCCATAATAGGAGTTGGCAATGAAA 140124 | ||| | ||||| || | || ||||| || || || ||||| |||| Sbjct 5524 GGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAA 5477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535072965309600