Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_024122.1 Length=162910 Score E Sequences producing significant alignments: (Bits) Value seq2257 109 6e-19 >seq2257 Length=8409 Score = 109 bits (120), Expect = 6e-19 Identities = 281/425 (66%), Gaps = 10/425 (2%) Strand=Plus/Plus Query 9400 CCAACACCTATTATGTCCGGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGTATTA 9459 || || || || ||| | ||||| ||||| || || || |||||||||||||| || | Sbjct 5485 CCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCTTGCGTGCTG 5544 Query 9460 ATCAAAACTGGTGATACATTGGACTCAATTAATGCCACTGCGAAAAGCATCGTGGATTAT 9519 ||| || || || | ||||| || |||||||| | | ||| || ||| Sbjct 5545 ATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATTGTTCGTTAC 5604 Query 9520 GTTTCCAAACGTGCTGGCATCGGATTCGATGTTGGGGCAATTCGTGGCATCGGTAGCCCT 9579 || || | ||||| || ||||| || ||| ||| ||||| | | | || ||| Sbjct 5605 GTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGCAGCGAA 5664 Query 9580 ATCCGTAAAGGGGAAATGGTCCATACAGGTCTGGTTCCATTCATCAAGTATTTGACTGG- 9638 || ||| || ||| || || ||| | || ||| ||||| || | | || Sbjct 5665 ATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAG-ATGTTCCAGGC 5723 Query 9639 TGCCCTGAAGTCTTGCTCTCAAGGCGGTATCCGTGGTGGATCGGCAACATGCTATGTTC- 9697 ||| ||||||| ||||| |||||||| | |||||||| ||||||| | ||||| Sbjct 5724 TGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCT----TGTTCT 5779 Query 9698 ---CCATCTGGCATTATCAATTTGATGATGTCGTTGTTCTCAAAAACAACCGTGGATTGG 9754 |||| ||||| || | || | | ||||| || ||||||||||| ||| Sbjct 5780 ACCCCATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTGGTGTGG 5839 Query 9755 AAGAGAACCGTGAACGCCGTATCGACTATGGGATTCAGATTAACCGCGTCATGTTCGAGC 9814 |||| |||||| || | | ||||| || ||||||| |||||| | ||| | ||| Sbjct 5840 AAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCTGTACCAGC 5899 Query 9815 GCCTG 9819 ||||| Sbjct 5900 GCCTG 5904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521135073852000