Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_024124.2 Length=169148 Score E Sequences producing significant alignments: (Bits) Value seq2257 111 2e-19 >seq2257 Length=8409 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27440 GGTGAAGTTCGACATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAAAA 27499 ||||||| | ||| |||||| | || |||| || ||||| |||| || || Sbjct 5674 GGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAGATGTTCCAGGCTGCGGTGAAG 5733 Query 27500 TCTTGTTCTCAAGGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGCAC 27559 || || || ||||| || | ||||||||||| || || || || || ||||||||| Sbjct 5734 TCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTCTACCCCATGTGGCAC 5793 Query 27560 TTAGAAGTAGAGAACCTATTAGTTCTGAAAAATAATAAAGGTGTGGATGAAAACCGTATT 27619 | ||||| || | || | |||||||| || || |||||||| |||||||||||| Sbjct 5794 CTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTGGTGTGGAAGAAAACCGTATT 5853 Query 27620 CGACATATGGACTACGGAATTCAGATTAA 27648 || || |||||||||| ||||||| || Sbjct 5854 CGTCACTTGGACTACGGTGTTCAGATCAA 5882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541094799956800