Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq5063 105 2e-17
seq4834 105 2e-17
seq2066 105 2e-17
>seq5063
Length=4177
Score = 105 bits (116), Expect = 2e-17
Identities = 145/198 (73%), Gaps = 6/198 (3%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || |||||||| | ||||| ||| || ||||| ||||
Sbjct 2422 AAGACTCTCACCGGCAAGACGATCACCCTCGAAGTCGAAGCCTCCGACACGATCGAGAAC 2363
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGA-CTT-ATC 206301
|| ||| ||||| || || |||||||||||| || || |||| || ||| |||
Sbjct 2362 GTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCCCCAGA---TCAACAGCGCTTGATC 2306
Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361
|||||||||||||| | || ||||| | ||| | |||| |||||| ||||||| |||
Sbjct 2305 TTCGCCGGAAAGCAACTCGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAAGGAG 2246
Query 206362 TCTACTCTTCACCTTGTT 206379
||||| || ||||| |||
Sbjct 2245 TCTACCCTCCACCTGGTT 2228
Score = 93.3 bits (102), Expect = 1e-13
Identities = 131/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 206196 AGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAA 206255
|||||| || |||||| | ||||| ||| || ||||| | ||| || ||| ||
Sbjct 1868 AGGAAAGACCATCACTCTTGAAGTCGAAGCCTCGGACACCATTGAAAATGTGAAGGCCAA 1809
Query 206256 GATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCA 206315
|||||| || || || ||||| || || || | || ||||| || || |||||
Sbjct 1808 GATTCAGGACAAGGAGGGAATCCCACCCGATCAGCAGCGCCTGATCTTTGCTGGCAAGCA 1749
Query 206316 GTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCT 206375
| | ||||| || | ||| | |||| |||||| ||||||| ||||| |||||||||||
Sbjct 1748 GCTCGAAGACGGGCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACCT 1689
Query 206376 TGTT 206379
|||
Sbjct 1688 GGTT 1685
Score = 91.5 bits (100), Expect = 3e-13
Identities = 140/197 (71%), Gaps = 6/197 (3%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || |||||||| | ||||| ||| || ||||| ||||
Sbjct 2798 AAGACCCTGACCGGCAAGACGATCACCCTCGAAGTCGAAGCCTCCGACACCATCGAGAAC 2739
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--ATC 206301
|| ||| ||||| || || || ||||||||| || || |||| || || |||
Sbjct 2738 GTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGA---TCAACAGCGTTTGATC 2682
Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361
|||||||||||||| | || ||||| | || || | || |||||| ||||||| ||
Sbjct 2681 TTCGCCGGAAAGCAACTCGAGGATGGCCGCACCCTGTCGGACTACAACATCCAGAAGGAA 2622
Query 206362 TCTACTCTTCACCTTGT 206378
|| ||||||||||| ||
Sbjct 2621 TCGACTCTTCACCTGGT 2605
>seq4834
Length=88581
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| || ||| ||| |||||||| ||||| || ||||| | ||||| ||| ||| |||
Sbjct 21336 CAAATCTTTGTCAAGACGCTCACCGGAAAGACCATCACCCTCGAAGTCGAAGCTTCGGAC 21277
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| |||| || ||| ||||||||||| || ||||| || || ||| ||
Sbjct 21276 ACAATCGAGAACGTGAAGGCGAAGATTCAAGATAAGGAAGGCATCCCTCCCGACCAACAG 21217
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| |||||||| ||| | || || || | ||| | | || |||||| |
Sbjct 21216 CGCCTCATCTTTGCCGGAAAACAGCTTGAGGACGGCCGTACTCTTTCAGACTACAACATT 21157
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||||||||||| |||
Sbjct 21156 CAGAAGGAGTCTACTCTCCAC 21136
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| ||||| || || || || ||||| | ||||| ||| || || || ||||
Sbjct 22529 AAGACGCTTACCGGGAAGACAATCACCCTTGAAGTCGAAGCCTCGGATACTATCGAGAAC 22470
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||||||||| || ||||| || |||||| ||| | || ||||||
Sbjct 22469 GTGAAGGCGAAGATTCAAGATAAGGAAGGCATCCCTCCGGACCAGCAACGCCTCATCTTC 22410
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | || || || | || || |||| |||||| ||||||| |||||
Sbjct 22409 GCCGGAAAGCAGCTCGAGGACGGCCGCACGTTATCCGACTACAACATCCAGAAGGAGTCC 22350
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| ||| | ||| | | |||||
Sbjct 22349 ACTCTCCACTTGGTTCTCCGTCTTCG 22324
Score = 96.9 bits (106), Expect = 8e-15
Identities = 91/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 206257 ATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAG 206316
|||||||| || ||||| || || ||| || | || || |||||||||||||||
Sbjct 21844 ATTCAAGATAAGGAAGGCATCCCTCCTGACCAGCAGCGCCTCATTTTCGCCGGAAAGCAG 21785
Query 206317 TTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372
| |||||||| || |||||| |||| |||||| ||||||| ||||||||||| ||
Sbjct 21784 CTTGAAGATGGCAGAACTTTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCA 21729
Score = 87.8 bits (96), Expect = 4e-12
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 204770 TGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 204829
|| ||||||||||| ||||||| || ||||| | |||||| || |||||||| ||||||
Sbjct 21729 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAAAGTTCTGCCATCTTCAAGCTGC 21788
Query 204830 TTTCCGGCGAAGATAAGCCGTTGTTG 204855
||||||||||| || || || || ||
Sbjct 21789 TTTCCGGCGAAAATGAGGCGCTGCTG 21814
>seq2066
Length=2850
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || ||||||||| | ||||| ||| || ||||| | ||
Sbjct 1055 AAGACCCTGACCGGCAAGACGATCACTCTCGAAGTCGAAGCCTCCGACACCATTGAGAAC 996
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| || || ||||| || || ||| | || ||||||
Sbjct 995 GTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGATCAGCAACGCCTCATCTTC 936
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | ||||| ||| | || | | || |||||| ||||||| |||||
Sbjct 935 GCCGGAAAGCAGCTCGAAGACGGACGAACCCTCTCGGACTACAACATCCAGAAGGAGTCC 876
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| |||||||| ||| | |||||||
Sbjct 875 ACCCTTCACCTGGTTCTTCGACTTCG 850
Score = 98.7 bits (108), Expect = 2e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || |||||||| | |||||||| ||| || || ||||
Sbjct 1416 AAGACCCTGACCGGCAAGACGATCACCCTCGAAGTGGAGGCTTCGGATACCATCGAGAAC 1357
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || ||||| || || ||| | || ||||||
Sbjct 1356 GTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAGCAACGCCTCATCTTC 1297
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | ||||| ||| | || | | || |||||| ||||||| || |||
Sbjct 1296 GCCGGAAAGCAGCTCGAAGACGGACGAACCCTCTCGGACTACAACATCCAGAAGGAATCT 1237
Query 206365 ACTCTTCACCTTGT 206378
||||||||||| ||
Sbjct 1236 ACTCTTCACCTGGT 1223
Score = 98.7 bits (108), Expect = 2e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || |||||||| | ||||| ||| || ||||| |||| || |||
Sbjct 1635 ACGGGCAAGACGATCACCCTCGAAGTCGAAGCCTCGGACACCATCGAGAACGTCAAGGCC 1576
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| || || || ||||| ||| || || || | || |||||||||||||||
Sbjct 1575 AAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAACAGCGCCTCATCTTCGCCGGAAAG 1516
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || ||||| | || ||| | || |||||| |||| || || || |||||||||
Sbjct 1515 CAGCTCGAGGATGGCCGCACATTGTCGGACTACAACATCCAAAAGGAATCGACTCTTCAC 1456
Query 206374 CTTGTTTTGAGACTTCG 206390
|| ||| | |||||||
Sbjct 1455 CTGGTTCTCCGACTTCG 1439
Score = 93.3 bits (102), Expect = 1e-13
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || ||||| ||| | ||||| ||| ||||||||| | || || |||
Sbjct 186 ACTGGCAAGACGATAACTCTCGAAGTCGAAGCTTCTGACACCATTGAGAATGTCAAGGCG 127
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || || || | || |||||||||||||||
Sbjct 126 AAGATTCAAGACAAGGAAGGCATTCCCCCAGATCAACAGCGCCTCATCTTCGCCGGAAAG 67
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| | || ||||| | ||| | | || |||||| ||||||| ||||| || || |||
Sbjct 66 CAACTCGAGGATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCAC 7
Query 206374 CTTGTT 206379
| |||
Sbjct 6 TTGGTT 1
Score = 91.5 bits (100), Expect = 3e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||| | ||| |||||||| || ||||| ||||||| || ||||| | | ||
Sbjct 850 CGAAGTCGAAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTT 909
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| ||| ||||| |||||||||||||||||||| || ||||| |||
Sbjct 910 CGTCCGTCTTCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGA 954
Score = 91.5 bits (100), Expect = 3e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||||| | ||| ||||||||||| || || || |||| || ||||| | ||| ||
Sbjct 1439 CGAAGTCGGAGAACCAGGTGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCGACAATGTG 1498
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| ||||| || |||||||||||||||||||| || || ||||||
Sbjct 1499 CGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGA 1543
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
|| |||||||||||||| || ||||||| || ||||| | | || | ||| |||||
Sbjct 1223 ACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGTCCGTCTTCG 1282
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|||||||||||||||||||| || ||||| |||
Sbjct 1283 AGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGA 1315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181707082986710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |