Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq2257 210 2e-49 >seq2257 Length=8409 Score = 210 bits (232), Expect = 2e-49 Identities = 311/438 (71%), Gaps = 2/438 (0%) Strand=Plus/Plus Query 41168 AAGCTGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCC 41227 ||| | || || || ||||| || |||||||| ||||| || || || || ||||| | Sbjct 5473 AAGATTTCCTTGCCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGC 5532 Query 41228 AGTTGCGTAGTGATTGAATCAGGTGATTCCCTGGGTTCTCTGAATGCTGTAACCTCTGCG 41287 |||||| |||| |||| | || ||||| | ||||| ||| || Sbjct 5533 TCTTGCGTGCTGATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCC 5592 Query 41288 ATCGTGAAGTATATTTCACAACGTGCTGGTATCGGTGTTAATGCTGGACACATTCGCGCA 41347 || || || | ||||| ||||| ||||||||| | |||| ||| | ||||||||| Sbjct 5593 ATTGTTCGTTACGTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCC 5652 Query 41348 ATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAA 41407 | || |||| ||||||||||||||| ||| || || | ||||||| || Sbjct 5653 GTAGGCAGCGAAATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCT-TCAA 5711 Query 41408 CATATT-CAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAAC 41466 || || ||| | ||||| || ||||| || ||||| ||||| ||||||||||| ||||| Sbjct 5712 GATGTTCCAGGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAAC 5771 Query 41467 GTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAA 41526 |||| || || || ||||| ||||||| |||| |||||||||||||| |||||| Sbjct 5772 CTTGTTCTACCCCATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCG 5831 Query 41527 AGGTGTTGAGAATAACCGCATTCGTCACCTGGATTATGGCGTTCAGCTTAACGATTTGAT 41586 ||||| || | ||||| ||||||||| |||| || || |||||| | ||| ||| | Sbjct 5832 TGGTGTGGAAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCT 5891 Query 41587 GTATAAGCGTTTAATCAA 41604 ||| |||| | ||||| Sbjct 5892 GTACCAGCGCCTGATCAA 5909 Score = 87.8 bits (96), Expect = 2e-12 Identities = 190/282 (67%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 42926 GTTGCCCGATATGAAGAACAAAAACATCGCGTATTCGAAACTTTGACTGAAAAACAACTA 42985 || || || || || | |||||| ||| | || |||| ||| |||||| || | Sbjct 7234 GTGGCTCGCTACGACCAGCAAAAATATCCGATTTTTGAAAAGCTGATTGAAAAGCAGTTG 7293 Query 42986 TCATTCTTCTGGCGACCGGAAGAAGTGGATCTGTCGATCGACCGTATGCAGTATGCAAAA 43045 || ||||||||||| ||||| |||||||| | | ||||| || | ||| || Sbjct 7294 TCCTTCTTCTGGCGTCCGGAGGAAGTGGACATTACCCAGGACCGGATCGACTATCAGAAC 7353 Query 43046 ATGCCGGAACACGAGAAAATCATTTTTGATTCTAACCTGCAATATCAAACCCTGTTAGAT 43105 |||| || ||||| || |||||| || ||| | ||||| ||| || | ||| Sbjct 7354 CTGCCTGACCACGAAAAGCACATTTTCATCAGCAATCTGAAGTATCAGACCTTGCTGGAT 7413 Query 43106 ACCATTCAGGGACGTGGCCCTAACCTGGCGTTTCTCCCGATTGCCTCTGATGTTTCA-AT 43164 |||| ||||| || |||| ||| |||| || || || | | || ||| | | Sbjct 7414 TCCATCCAGGGCCGCAGCCCCAACGTGGCCTTCCTGCCTTTGGTATC-GATTCCGGAGCT 7472 Query 43165 GGAAACGTGGATCGAAACATGGGCTTTCAGTGAAACAATTCA 43206 |||||| ||||| ||||| ||||||||| || || ||||| Sbjct 7473 GGAAACCTGGATTGAAACCTGGGCTTTCTCCGAGACGATTCA 7514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569965689447600