Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_025425.1
Length=163424
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 143 3e-29
>seq2257
Length=8409
Score = 143 bits (158), Expect = 3e-29
Identities = 274/401 (68%), Gaps = 2/401 (0%)
Strand=Plus/Minus
Query 135361 TTAATCTGTACGCCGTAGTCAAGATGGCGAATGCGGTTATCTTCCACGCCCTTATTGTTC 135420
|| ||||| || |||||||| | || ||||| ||||| |||||||| || ||||||
Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823
Query 135421 TTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGTCGCCGCC 135480
|| | || | ||| |||| | || | |||||||| ||||| | | || |||||
Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763
Query 135481 CCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTTCCAGAAT 135540
|| ||||| | |||||||| ||||| ||||| || |||| ||| || || ||||
Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703
Query 135541 GGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGAT-CCTTCCGCGCGAAT 135599
|| | || || || | |||||||| | ||| || | | ||| | ||||||||
Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCAC-CACGAATTTCGCTGCCTACGGCGCGAAT 5644
Query 135600 CATGCCAGCGTTGATACCGATACCCGCACGCTTGCTAATATACTTGATGATTGCATTTGC 135659
|||| | |||||||||||||| ||||||| | || | || || | |
Sbjct 5643 GCGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTGGT 5584
Query 135660 TGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCAATCACCACACACGAACTAAATTG 135719
|| | ||||||| | || ||| |||| ||| |||| ||| || || || || ||
Sbjct 5583 CGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTG 5524
Query 135720 GCGTGTTGGGGTACGCACACCAGCCATAATCGGAGTAGGCA 135760
||| || || || ||||| |||||||| || || || ||||
Sbjct 5523 GCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCA 5483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 522779719446400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |