Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_025446.1
Length=157308
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 105 7e-18
>seq2257
Length=8409
Score = 105 bits (116), Expect = 7e-18
Identities = 281/424 (66%), Gaps = 8/424 (2%)
Strand=Plus/Plus
Query 4042 CCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTTCTT 4101
|| || ||||||||| | ||||| || || || || ||||| ||||| ||||| || ||
Sbjct 5485 CCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCTCTTGCGTGCTG 5544
Query 4102 ATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGATTAT 4161
||| || | |||| ||||| |||||||| || ||| |||||| |||
Sbjct 5545 ATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGACCAGCGCCATTGTTCGTTAC 5604
Query 4162 GTATCCAAACGCGCTGGGATCGGATTTGATGTCGGAGCAATTCGTGGCATCGGTAGCCCT 4221
|| || | || || || ||||| | ||| || ||||| | | | || |||
Sbjct 5605 GTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCGCCGTAGGCAGCGAA 5664
Query 4222 ATCCGAAAAGGTGAAATGGTGCACACAGGTCTGGTTCCTTTCATAAA-ATAT--CTGACT 4278
|| || |||||| ||||| ||| | || ||| | || || | | | ||
Sbjct 5665 ATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCAAGATGTTCCAGGCT 5724
Query 4279 GGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGCAAC-TTGCTATAT 4337
| || | ||||| ||||| |||||||| | ||||| || | ||||| ||| | ||
Sbjct 5725 GCGG---TGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAACCTTGTTCTAC 5781
Query 4338 CCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTCTTGA 4397
||| || ||||| || | || | |||| |||||||||||||||||| | ||
Sbjct 5782 CCC-ATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAACCGTGGTGTGGA 5840
Query 4398 AGAGAACCGTGAACGCCGTATCGACTATGGTATTCAGATCAACCGCGTCATGTTCGAACG 4457
||| |||||| || | | ||||| ||| |||||||||||||| | ||| | | ||
Sbjct 5841 AGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAGATCAACCGCTTGCTGTACCAGCG 5900
Query 4458 TCTG 4461
|||
Sbjct 5901 CCTG 5904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 503210356692800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |