Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2290 132 6e-26 seq4924 113 5e-20 >seq2290 Length=1989 Score = 132 bits (146), Expect = 6e-26 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 146998 TGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 ||||||| ||||| ||| ||||| | ||||||||| || |||||||| || |||||| Sbjct 903 TGGGCCATCATGTGGGTCAGCAGAGCGTAGCTGGCGATATTGAAGGGCACACCCAGGAAA 962 Query 147058 ATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGG 147117 || ||| | | |||||| |||||||| || |||| || ||||| || || |||||| Sbjct 963 ATATCCGCACTGCGCTGGTAGAGCTGGCAGGACAGCTTGCCATCGGCTACATAGAACTGG 1022 Query 147118 CACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAG 147177 ||||| |||||| || ||||| ||||| | || ||||| ||||||||||||| Sbjct 1023 AACAGGGCGTGGCAAGGGGGCAGAGCCATCTGGCCCACATCCGCCACGTTCCAGGCCGAG 1082 Query 147178 ACCACCAGCCG 147188 || | ||| || Sbjct 1083 ACGATCAGGCG 1093 >seq4924 Length=20857 Score = 113 bits (124), Expect = 5e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| | ||| ||||| || || | ||||| ||||| || |||||||| |||||||| Sbjct 496 CTTTAAGCCAGTCACATGCGCGATCATGTGAGTGAGGAGACCATAGCTGGCGATGTTGAA 437 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || || ||| |||| || || || | |||||| || || ||||| || |||||||| Sbjct 436 GGGCACTCCAAGGGCCATATCGCCGGAACGCTGGTATAGTTGACACGACAGTTCCCCGTC 377 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 | || || ||||| |||| | | |||||||| |||| ||||| Sbjct 376 GCTTACATAGAACTGACACATGGTATGGCACGGTGGCAATGCCAT 332 Score = 104 bits (114), Expect = 3e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| | ||| ||||| || || | ||||| ||| || || ||||||||||||||||| Sbjct 717 CTTTAAGCCAGTCACATGTGCTATCATGTGGGTTAGAAGACCATAGCTGGCTATGTTGAA 658 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || || ||| |||| || || || | |||||||| ||||||||| || || || || Sbjct 657 GGGCACTCCAAGGGCCATATCGCCGGAACGCTGGTACAACTGGCACGACAGTTCGCCATC 598 Query 147102 GGCCACGTAAAACTGGCACA 147121 | ||||| ||||| |||| Sbjct 597 GCTGACGTAGAACTGACACA 578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583433225064000