Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq486 143 1e-29 >seq486 Length=1082 Score = 143 bits (158), Expect = 1e-29 Identities = 234/331 (71%), Gaps = 16/331 (5%) Strand=Plus/Minus Query 36713 TCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCAC--CACGGACTGCGCCTGCT 36770 |||||||||| || ||||| ||||||| ||||||| | | | ||| | ||| ||| Sbjct 536 TCGGCCCTGCCGGTACCGGCAAGACCTACCTGGCCGTGGCCTGCGCGGTCGACGC--GCT 479 Query 36771 GGAGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAA 36830 |||| | | | | || || | | ||||| || |||||||||| ||||| Sbjct 478 GGAGCGTGAACAGGTGCGTCGCATCCTGCTGGTACGCCCGGCAGTCGAGGCCGGCGAGAA 419 Query 36831 GCTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCGTACCTGATCCCGATGCT 36890 |||||||| ||||||||||| | | | ||||||| | ||||||||| |||| || Sbjct 418 GCTCGGCTTCCTGCCCGGCGACCTGGCCCAGAAGATCGACCCGTACCTGCGCCCGCTGTA 359 Query 36891 GGACGCGGTGATCGACCTGGTTGGCC-CGACGA--TGGCCAAGCGCCTGCAGGAGACCCG 36947 ||||| || ||| || | ||| ||| | ||||||||| || || || Sbjct 358 CGACGCCCTGTACGAGATGCTCGGCTTCGAACACGTGGCCAAGC---TGATCGAA---CG 305 Query 36948 CCAGCT---CGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTT 37004 |||| | ||||||||||||||||||||||||||| ||||| ||| | ||| ||| || Sbjct 304 CCAGGTGATCGAGATCGCCCCGCTGGCCTACATGCGCGGCCGCACCCTGAACAACAGCTT 245 Query 37005 CCTCATCGCCGACGAGATGCAGAACGCCACC 37035 | ||||| |||||||| |||||| ||||| Sbjct 244 CATCATCCTCGACGAGAGCCAGAACACCACC 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180780676315380