Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_026594.1
Length=56537
Score E
Sequences producing significant alignments: (Bits) Value
seq486 143 1e-29
>seq486
Length=1082
Score = 143 bits (158), Expect = 1e-29
Identities = 234/331 (71%), Gaps = 16/331 (5%)
Strand=Plus/Minus
Query 36713 TCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCAC--CACGGACTGCGCCTGCT 36770
|||||||||| || ||||| ||||||| ||||||| | | | ||| | ||| |||
Sbjct 536 TCGGCCCTGCCGGTACCGGCAAGACCTACCTGGCCGTGGCCTGCGCGGTCGACGC--GCT 479
Query 36771 GGAGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAA 36830
|||| | | | | || || | | ||||| || |||||||||| |||||
Sbjct 478 GGAGCGTGAACAGGTGCGTCGCATCCTGCTGGTACGCCCGGCAGTCGAGGCCGGCGAGAA 419
Query 36831 GCTCGGCTACCTGCCCGGCGGCATCGAAGAGAAGATGGCTCCGTACCTGATCCCGATGCT 36890
|||||||| ||||||||||| | | | ||||||| | ||||||||| |||| ||
Sbjct 418 GCTCGGCTTCCTGCCCGGCGACCTGGCCCAGAAGATCGACCCGTACCTGCGCCCGCTGTA 359
Query 36891 GGACGCGGTGATCGACCTGGTTGGCC-CGACGA--TGGCCAAGCGCCTGCAGGAGACCCG 36947
||||| || ||| || | ||| ||| | ||||||||| || || ||
Sbjct 358 CGACGCCCTGTACGAGATGCTCGGCTTCGAACACGTGGCCAAGC---TGATCGAA---CG 305
Query 36948 CCAGCT---CGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTT 37004
|||| | ||||||||||||||||||||||||||| ||||| ||| | ||| ||| ||
Sbjct 304 CCAGGTGATCGAGATCGCCCCGCTGGCCTACATGCGCGGCCGCACCCTGAACAACAGCTT 245
Query 37005 CCTCATCGCCGACGAGATGCAGAACGCCACC 37035
| ||||| |||||||| |||||| |||||
Sbjct 244 CATCATCCTCGACGAGAGCCAGAACACCACC 214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 180780676315380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |