Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_026607.2
Length=159914
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 150 2e-31
>seq2257
Length=8409
Score = 150 bits (166), Expect = 2e-31
Identities = 300/440 (68%), Gaps = 6/440 (1%)
Strand=Plus/Minus
Query 133262 TTGATTTGCAGACCATAGTCTAGATGACGAATACGGTTTTCATCTACGCCTTTGTTGTTC 133321
||||| || | ||| ||||| | ||||||||||||||||| || || || |||||||
Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823
Query 133322 TTTAATACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCA 133381
|| | |||| ||| |||| || || || |||||||| || || | | || || |||
Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763
Query 133382 CCACCACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAA 133441
|||||||| || |||||||| || || || || || |||| ||| || || ||||
Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703
Query 133442 GGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATC 133501
|| | || || |||| | |||| ||| || ||||| |||| | || |||||
Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATG 5643
Query 133502 ATACCGGCGTTGATGCCGATACCAGCTCGCTTGCTGATA--TACTTAATAATACTGTTAC 133559
|| | ||||| |||||||| || |||| ||| | || || ||| | |
Sbjct 5642 CGGCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATGGCGCTGG 5585
Query 133560 TTGCCGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACT 133619
| | ||||| || | ||| ||| || ||| || | || ||||| || ||||
Sbjct 5584 TCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACT 5525
Query 133620 GACGAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCTGTCGAGT-A 133678
| ||||| || || || | || ||||| || || || ||||| ||||||| | | |
Sbjct 5524 GGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCT-TGAATTGC 5466
Query 133679 GATACAGCGTCATAAAAGCG 133698
||||| ||||| ||||||||
Sbjct 5465 GATACGGCGTCGTAAAAGCG 5446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511548773850400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |