Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5063 120 3e-22 seq7237 118 1e-21 seq4834 111 2e-19 seq2066 109 6e-19 >seq5063 Length=4177 Score = 120 bits (132), Expect = 3e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 134495 GAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTG 134554 |||||| | ||| ||||| || || |||||||| || ||||||||||| | |||| | Sbjct 2595 GAGTCGGAGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCG 2654 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || ||||| || || || || || ||||||||||| ||||| || || || ||||| Sbjct 2655 GCCATCCTCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTC 2714 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || ||||| || | |||||||| | ||| || ||||| || Sbjct 2715 CTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAGGCTTCGACTTCGAGGGT 2774 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| |||||||| Sbjct 2775 GATCGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 2813 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || |||||||||||| || ||| | || ||| Sbjct 2229 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCG 2288 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || || || || || ||||| ||||| ||||| || || || |||||||| || || Sbjct 2289 AGTTGCTTTCCGGCGAAGATCAAGCGCTGTTGATCTGGGGGAATTCCTTCTTTGTCCTGG 2348 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| || | |||||||| | ||| || ||||| || || || || Sbjct 2349 ATCTTGGCCTTGACGTTCTCGATCGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTCTTG 2408 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| | ||| || || || ||||||||| Sbjct 2409 CCGGTGAGAGTCTTCACAAAGATTTGCATT 2438 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||| || | ||| || | || ||||| || ||||| ||||| || |||||||||||| Sbjct 1665 TTTCCACCGCGGAGACGGAGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCG 1724 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | ||| | ||| |||||||| ||||| ||||| |||| |||||||||||||| Sbjct 1725 GAGAGAGTGCGCCCGTCTTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGT 1784 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || || || || ||||| || || || || | ||||| || | ||| Sbjct 1785 GGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTTTCAATGGTGTCCGAGGCTTCG 1844 Query 134664 ACGTCGAGAGTAATGGTTTTACC 134686 || || ||||| ||||| || || Sbjct 1845 ACTTCAAGAGTGATGGTCTTTCC 1867 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||| || | ||| || | |||||||| || ||||| ||||| || || |||||||| Sbjct 1895 TTTCCACCGCGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATATTGTAGTCC 1954 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | ||| | ||| |||||||| || || ||||| || | |||||||||||||| Sbjct 1955 GAGAGAGTGCGCCCGTCTTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTGCTGATCGGGT 2014 Query 134604 GGTATGCCTTCTTTTTCTTGAAT 134626 || || || || || || ||||| Sbjct 2015 GGGATTCCCTCCTTGTCCTGAAT 2037 >seq7237 Length=102105 Score = 118 bits (130), Expect = 1e-21 Identities = 269/402 (67%), Gaps = 2/402 (0%) Strand=Plus/Minus Query 7534 AAAATCAACGGCGAATG-CGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGG 7592 || ||| |||| ||| | || ||||||| ||||| |||||| |||||||||| || || Sbjct 86291 AAGATCGACGG-GAAGGTCGTGGAACGACCCCAACATATGCTGATGCGCGTGGCCGTCGG 86233 Query 7593 CATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACA 7652 || ||| |||||||| |||||||| | ||||| ||| | | ||||| | Sbjct 86232 AATCCACAAGGAAGACATCAACGCCGCCATCGAAACCTACAACCTCATGTCCGAGCGGTG 86173 Query 7653 GTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTC 7712 ||| || || || ||||| || | || ||| ||||| | ||| || || ||| Sbjct 86172 GTTCACCCATGCCTCGCCGACGCTCTTCAACGCCGGCACCTGCAAGCCCCAGATGAGCTC 86113 Query 7713 GTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA 7772 || || |||| |||||| | || ||| |||||||||||| | ||| || || | | Sbjct 86112 CTGCTTCCTGCTCACCATGAGTGACGACTCCATCGACGGCATCTTCAAGACCCTCTGGCA 86053 Query 7773 TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGC 7832 ||||| || ||||| | || ||||||||| || || || || || | | || || Sbjct 86052 GTGCGCTCTGATCTCCAAGTCCGCCGGCGGAATCGGCCTCAATGTCCACTGCATTCGAGC 85993 Query 7833 CAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCG 7892 | ||| | | ||||| |||||||| | ||| ||| | || ||| |||| Sbjct 85992 CTCCGGAACTCTCATCGCTGGGACCAACGGCACCTCCAACGGACTCATTCCTATGCTGCG 85933 Query 7893 CGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAA 7934 || | ||| ||| | | || | || ||||| || ||||| Sbjct 85932 GGTCTACAACAACACCGCTCGCTACGTCGACCAAGGAGGAAA 85891 >seq4834 Length=88581 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || ||||| |||||||||||||| || || | ||| || ||||| Sbjct 21136 GTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGAAAGAGTACGGCCGTCCTCAAGCTG 21195 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || ||||| || | ||||| || ||||| || |||||||| || |||||||| || Sbjct 21196 TTTTCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCTTCCTTATCTTGAATCTT 21255 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || || | |||||| || | ||| || ||||| || ||||| || ||||| Sbjct 21256 CGCCTTCACGTTCTCGATTGTGTCCGAAGCTTCGACTTCGAGGGTGATGGTCTTTCCGGT 21315 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | || || || || |||||||| Sbjct 21316 GAGCGTCTTGACAAAGATTTGCAT 21339 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| ||||| || |||||||||||| | ||| | ||| |||||||| Sbjct 22341 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGATAACGTGCGGCCGTCCTCGAGCTG 22400 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || || || | || ||||| || || || |||||||| || |||||||| || Sbjct 22401 CTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGAGGGATGCCTTCCTTATCTTGAATCTT 22460 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || || | || || || | ||| || || || || || || || ||||| Sbjct 22461 CGCCTTCACGTTCTCGATAGTATCCGAGGCTTCGACTTCAAGGGTGATTGTCTTCCCGGT 22520 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| || ||||| Sbjct 22521 AAGCGTCTTCACGAAGATCTGCAT 22544 >seq2066 Length=2850 Score = 109 bits (120), Expect = 6e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| ||||| || ||||||||||| || ||| | || ||||| || Sbjct 7 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGTTG 66 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || || || | ||||| ||||| || || |||||||| || |||||||| || Sbjct 67 CTTTCCGGCGAAGATGAGGCGCTGTTGATCTGGGGGAATGCCTTCCTTGTCTTGAATCTT 126 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| || | ||||| || | ||| || |||||||| || || || || || Sbjct 127 CGCCTTGACATTCTCAATGGTGTCAGAAGCTTCGACTTCGAGAGTTATCGTCTTGCCAGT 186 Query 134690 TAAAGTTTTAACGAAAATTTGCATT 134714 || || || ||||| ||||||||| Sbjct 187 CAAGGTCTTCACGAAGATTTGCATT 211 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||||| | || ||||| || ||||| ||||| || ||||||||||| Sbjct 842 TTCCACCGCGAAGTCGAAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCG 901 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | ||| |||||||| || || || || || | || |||||||| || | Sbjct 902 AGAGGGTTCGTCCGTCTTCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGATCTGGGG 961 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || || || ||||| || || ||||| || | |||||||| | ||| | Sbjct 962 GGATTCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGGAGGCTTCGA 1021 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | |||||||| || || || ||||| | || || ||||| || ||||| Sbjct 1022 CTTCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1070 Score = 105 bits (116), Expect = 7e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CG 134543 |||| || | ||||| | || ||||| || || ||||||||||| |||||||||| || Sbjct 1431 TTCCACCGCGAAGTCGGAGAACCAGGTGAAGAGTCGATTCCTTTTGGATGTTGTAGTCCG 1490 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 ||| ||| | || |||||||| || || || || || | ||||| ||||| || Sbjct 1491 ACAA-TGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGATCTGGG 1549 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || |||||||| || || || || || ||||| || | ||||| || | ||| Sbjct 1550 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGGCTTCG 1609 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || || || || || || || ||||| || ||||| Sbjct 1610 ACTTCGAGGGTGATCGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1659 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | || | ||| || ||||| ||||| || ||||||||||| Sbjct 1926 TTCCACCACGGAGACGGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCG 1985 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | |||| | || ||||| || || || || || ||||||||||| ||||| || | Sbjct 1986 ACAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGG 2045 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || || || || || ||||| || | ||||| || | ||| | Sbjct 2046 GAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGGCTTCGA 2105 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || || || || || || || || || ||||| || ||||| Sbjct 2106 CTTCGAGGGTGATCGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2154 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | |||||| | || ||||| || || |||||||| || ||||||||||| Sbjct 1205 CCTCCACGGAGTCGAAGGACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAG 1264 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| || || || || || | || |||||||| || || Sbjct 1265 AGGGTTCGTCCGTCTTCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGATCTGGGGGG 1324 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| || | || || || | ||||| Sbjct 1325 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGCCTCCACT 1384 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| || || || || ||||| | || || ||||| ||||||||| Sbjct 1385 TCGAGGGTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATT 1432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505350955725200