Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq2257 145 8e-30 >seq2257 Length=8409 Score = 145 bits (160), Expect = 8e-30 Identities = 302/444 (68%), Gaps = 12/444 (3%) Strand=Plus/Minus Query 143126 GTTGATTTGAAGACCATAGTCCAGGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTT 143185 |||||| |||| ||| ||||||| ||||||||| |||||||| || || || |||||| Sbjct 5883 GTTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTT 5824 Query 143186 CTTAAGTACGAGGAGATTCTCGACTTCAAGATGCCAAATTGGATAGTACAATGTTGCGGC 143245 ||| || || || || | || ||||| || ||||| || || ||| |||| ||||| || Sbjct 5823 CTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGC 5764 Query 143246 ACCACCACGAACTCCGCCTTGGGAACAGGATTTAACTGCAGTTTGGAAGTGTTTCCAGAA 143305 ||||||||| || |||||||| || ||||| || || |||| ||||| || |||| Sbjct 5763 ACCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAA 5704 Query 143306 AGGAATAACTCCAGTATGCTTGACTTCACCGTTTCCGATTTTTGAACCTTCTGCACGCAA 143365 || | || || || | ||||||| | |||| ||| | || || | Sbjct 5703 CGGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAAT 5644 Query 143366 CATCCCCGCGTTAATGCCAATACCTGCACGCTTACTGATA--TACTCAATAATGCTTGCA 143423 || | || || || ||||| ||||||| ||| | || || |||| || Sbjct 5643 GCGGCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATG---GCG 5589 Query 143424 CTGGCTTTG---TTAATTGACTTAAGTGAGTCACCAGCTTCAATAACAACACAAGAGCTA 143480 |||| || || || | || ||| || ||| || | || |||||||| Sbjct 5588 CTGGTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTG 5529 Query 143481 AACTGACGAGTCGGTGTACGAGCCCCGGCCATAATTGGAGTAGGCAAAGAAAT-TTGACG 143539 ||||| ||||| ||||| || | || ||||| || || || ||||| ||||| |||| Sbjct 5528 AACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCTTGAAT 5469 Query 143540 AGTAGATACGGCGTCATAAAAACG 143563 | ||||||||||| ||||| || Sbjct 5468 TG-CGATACGGCGTCGTAAAAGCG 5446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544912041579600