Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_027331.1
Length=170341
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 145 8e-30
>seq2257
Length=8409
Score = 145 bits (160), Expect = 8e-30
Identities = 302/444 (68%), Gaps = 12/444 (3%)
Strand=Plus/Minus
Query 143126 GTTGATTTGAAGACCATAGTCCAGGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTT 143185
|||||| |||| ||| ||||||| ||||||||| |||||||| || || || ||||||
Sbjct 5883 GTTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTT 5824
Query 143186 CTTAAGTACGAGGAGATTCTCGACTTCAAGATGCCAAATTGGATAGTACAATGTTGCGGC 143245
||| || || || || | || ||||| || ||||| || || ||| |||| ||||| ||
Sbjct 5823 CTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGC 5764
Query 143246 ACCACCACGAACTCCGCCTTGGGAACAGGATTTAACTGCAGTTTGGAAGTGTTTCCAGAA 143305
||||||||| || |||||||| || ||||| || || |||| ||||| || ||||
Sbjct 5763 ACCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAA 5704
Query 143306 AGGAATAACTCCAGTATGCTTGACTTCACCGTTTCCGATTTTTGAACCTTCTGCACGCAA 143365
|| | || || || | ||||||| | |||| ||| | || || |
Sbjct 5703 CGGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAAT 5644
Query 143366 CATCCCCGCGTTAATGCCAATACCTGCACGCTTACTGATA--TACTCAATAATGCTTGCA 143423
|| | || || || ||||| ||||||| ||| | || || |||| ||
Sbjct 5643 GCGGCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATG---GCG 5589
Query 143424 CTGGCTTTG---TTAATTGACTTAAGTGAGTCACCAGCTTCAATAACAACACAAGAGCTA 143480
|||| || || || | || ||| || ||| || | || ||||||||
Sbjct 5588 CTGGTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTG 5529
Query 143481 AACTGACGAGTCGGTGTACGAGCCCCGGCCATAATTGGAGTAGGCAAAGAAAT-TTGACG 143539
||||| ||||| ||||| || | || ||||| || || || ||||| ||||| ||||
Sbjct 5528 AACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCTTGAAT 5469
Query 143540 AGTAGATACGGCGTCATAAAAACG 143563
| ||||||||||| ||||| ||
Sbjct 5468 TG-CGATACGGCGTCGTAAAAGCG 5446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 544912041579600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |