Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_027340.1 Length=162160 Score E Sequences producing significant alignments: (Bits) Value seq2257 159 4e-34 >seq2257 Length=8409 Score = 159 bits (176), Expect = 4e-34 Identities = 296/427 (69%), Gaps = 8/427 (2%) Strand=Plus/Minus Query 58331 GATCAGACGATCCCAGAGCACGCCGTTGATCTGAACACCGTAGTC--AGTACGGCGCTCG 58388 |||||| || | | |||| || ||||||||||||||||||||| ||| | || Sbjct 5907 GATCAGGCGCTGGTACAGCAAGCGGTTGATCTGAACACCGTAGTCCAAGT--GACGAATA 5850 Query 58389 CGGTTGTTCTCAATACCACGGTTGTTCTTCAGCACGATCA-TGTCATCGAACTGGAAGTG 58447 ||||| | || | |||||||||||||||||| || | || ||| || | | | ||| Sbjct 5849 CGGTTTTCTTCCACACCACGGTTGTTCTTCAGAACCAGCAGTGTT-TCCACTTCCAGGTG 5791 Query 58448 CCACATCGGGTAATACATGGTTGCTGAGCCGCCACGGATACCACCCTGAGAACAGCTCTT 58507 |||||| ||||| ||| |||||| | || ||||| | || || || || ||| ||| Sbjct 5790 CCACATGGGGTAGAACAAGGTTGCCGCACCACCACGCACGCCGCCTTGCGAGCAGGACTT 5731 Query 58508 CAGATCACCAACGAACTTCTTGATGAACGGGATCGTACCGGTATGA-GTCATCTCACCGT 58566 || || | |||| |||||| |||||| | ||| || || || | ||||| Sbjct 5730 CACCGCAGCCTGGAACATCTTGAAGAACGGCAGGCAACCCGTGTGTTGTGCT-TCACCAC 5672 Query 58567 CGCGGATAGAGGAACCCAGGGCACGGATAGCGCCGAAGTCAACACCGATACCAGCACGCT 58626 | || || | || | ||| || || ||| | | ||||||||| ||||||| Sbjct 5671 CACGAATTTCGCTGCCTACGGCGCGAATGCGGCCACCATTGATACCGATACCGGCACGCT 5612 Query 58627 TAGACACGTATTTCACGATTGCGGTGCCAGTAGCAGTAATGCTGTCCAGGGTGTCACCAG 58686 |||||||| || || ||| || || ||| | |||||||||||| |||| || Sbjct 5611 GTGACACGTAACGAACAATGGCGCTGGTCGTGGCATTGATGCTGTCCAGGCTGTCGTCAC 5552 Query 58687 ACTTGATCAGGACACATGAGCTGAACTGACGGGTACGGGTACGCACGCCTGCCATGATAG 58746 | | |||||| || || ||||||||||| || || | || |||||||| |||||||| | Sbjct 5551 ATTCGATCAGCACGCAAGAGCTGAACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGG 5492 Query 58747 GTGTTGG 58753 | || || Sbjct 5491 GCGTGGG 5485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518735299152000