Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_027344.1
Length=158099
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 141 9e-29
>seq2257
Length=8409
Score = 141 bits (156), Expect = 9e-29
Identities = 298/440 (68%), Gaps = 6/440 (1%)
Strand=Plus/Minus
Query 14844 TTGATTTGCAGACCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTC 14903
||||| || | |||||| || | |||||||| |||||||| || ||||| |||||||
Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823
Query 14904 TTTAATACCAAAAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCA 14963
|| | |||| || |||| || || || |||||||| || || | | || || |||
Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763
Query 14964 CCACCACGGACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAA 15023
|||||||| || |||||||| || || || || || |||| ||| || || ||||
Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703
Query 15024 GGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATC 15083
|| | || || |||| | |||| ||| || ||||| |||| | || |||||
Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATG 5643
Query 15084 ATACCGGCGTTGATGCCTATACCAGCTCGCTTGCTGATA--TACTTAATAATACTGTTAC 15141
|| | ||||| || ||||| || |||| ||| | || || ||| | |
Sbjct 5642 CGGCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATGGCGCTGG 5585
Query 15142 TTGCTGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACT 15201
| | ||||| || | ||| ||| || ||| || | || ||||| || ||||
Sbjct 5584 TCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACT 5525
Query 15202 GACGAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCTGTCGAGT-A 15260
| ||||| || || || | || ||||| || || || ||||| ||||||| | | |
Sbjct 5524 GGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCT-TGAATTGC 5466
Query 15261 GATACAGCGTCATAAAAGCG 15280
||||| ||||| ||||||||
Sbjct 5465 GATACGGCGTCGTAAAAGCG 5446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505741319076400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |