Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_027349.1 Length=166977 Score E Sequences producing significant alignments: (Bits) Value seq2257 84.2 2e-11 >seq2257 Length=8409 Score = 84.2 bits (92), Expect = 2e-11 Identities = 118/164 (72%), Gaps = 4/164 (2%) Strand=Plus/Minus Query 139546 CTGGACGCCATAATCCATATGACGGATACGGTTTTCTTCTACGCCTTTGTTATTTTTCAA 139605 ||| || || || |||| ||||| |||||||||||||| || || ||| || |||| Sbjct 5877 CTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTCTTCAG 5818 Query 139606 AACGAGAAGATTTTCAACTTCCAAATGCCAAATAGG--ATAATAAGCAGTAGCAGCGCCG 139663 ||| || || |||| ||||||| ||||| || || | || ||| || || || || Sbjct 5817 AACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAG--GTTGCCGCACCA 5760 Query 139664 CCACGAATTCCGCCCTGTGAACACGATTTAACAGCAGTCTGAAA 139707 ||||| | ||||| || || || || || || |||| ||| || Sbjct 5759 CCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAA 5716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534148252125200