Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_027364.1
Length=348113
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 86.0 1e-11
>seq2257
Length=8409
Score = 86.0 bits (94), Expect = 1e-11
Identities = 257/389 (66%), Gaps = 12/389 (3%)
Strand=Plus/Minus
Query 260035 TAGTCCAGTTGACGCACACGGTTAAACTCAGTACCTTTGTTATTTTTAAGGACTACCAAG 260094
||||||| ||||| | |||||| || ||| ||| || || || || | ||
Sbjct 5867 TAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTCTTCAGAACCAGCAGT 5808
Query 260095 TTATCAAATTCCAAATGCCACAATGGGAAGTGAACA--GTTGCTGCACCACCACGAACAC 260152
| || | ||||| ||||||| ||| || |||| ||||| ||||||||||| || |
Sbjct 5807 GTTTCCACTTCCAGGTGCCACATGGGGTAG--AACAAGGTTGCCGCACCACCACGCACGC 5750
Query 260153 CACCTTGTGAACAGCTTTTAA---CAGTCTTAGCAGTAGCTGCAATGAACGG-AATCAGC 260208
| ||||| || ||| || | ||| || | | | || || |||||| | || |
Sbjct 5749 CGCCTTGCGAGCAGGACTTCACCGCAGCCT--GGAACATCTTGAA-GAACGGCAGGCAAC 5693
Query 260209 CCAGTGTGTACTGCATCACCTGAACGAATCTCGGAGTCCAGAGCACGAATGCGGCCCATA 260268
|| |||||| ||| ||||| |||||| ||| | | | || ||||||||||| |
Sbjct 5692 CC-GTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATGCGGCCACCA 5634
Query 260269 TTAATACCAAGACCAGCTTTACGTGAAATATAACGTAGAATAGCGTGGTTAGAGGAACCA 260328
|| ||||| | ||| || |||| | ||||| | ||| ||| | | | || |
Sbjct 5633 TTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTGGTCGTGGCATTG 5574
Query 260329 ATACTATCCAAGCTGTCACCAACGTTTAGTACTACACAAGAGCTAAACTGACGTGTATTT 260388
|| || |||| |||||| || | | | || |||||||| ||||| || || |
Sbjct 5573 ATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTGGCGAGTGGGT 5514
Query 260389 GTACGTAGACCAGCCATAATAGGCGTAGG 260417
|| || | |||||||| || ||||| ||
Sbjct 5513 GTGCGCACGCCAGCCATGATGGGCGTGGG 5485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1113723225150480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |