Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq2257 86.0 1e-11 >seq2257 Length=8409 Score = 86.0 bits (94), Expect = 1e-11 Identities = 257/389 (66%), Gaps = 12/389 (3%) Strand=Plus/Minus Query 260035 TAGTCCAGTTGACGCACACGGTTAAACTCAGTACCTTTGTTATTTTTAAGGACTACCAAG 260094 ||||||| ||||| | |||||| || ||| ||| || || || || | || Sbjct 5867 TAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTCTTCAGAACCAGCAGT 5808 Query 260095 TTATCAAATTCCAAATGCCACAATGGGAAGTGAACA--GTTGCTGCACCACCACGAACAC 260152 | || | ||||| ||||||| ||| || |||| ||||| ||||||||||| || | Sbjct 5807 GTTTCCACTTCCAGGTGCCACATGGGGTAG--AACAAGGTTGCCGCACCACCACGCACGC 5750 Query 260153 CACCTTGTGAACAGCTTTTAA---CAGTCTTAGCAGTAGCTGCAATGAACGG-AATCAGC 260208 | ||||| || ||| || | ||| || | | | || || |||||| | || | Sbjct 5749 CGCCTTGCGAGCAGGACTTCACCGCAGCCT--GGAACATCTTGAA-GAACGGCAGGCAAC 5693 Query 260209 CCAGTGTGTACTGCATCACCTGAACGAATCTCGGAGTCCAGAGCACGAATGCGGCCCATA 260268 || |||||| ||| ||||| |||||| ||| | | | || ||||||||||| | Sbjct 5692 CC-GTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATGCGGCCACCA 5634 Query 260269 TTAATACCAAGACCAGCTTTACGTGAAATATAACGTAGAATAGCGTGGTTAGAGGAACCA 260328 || ||||| | ||| || |||| | ||||| | ||| ||| | | | || | Sbjct 5633 TTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTGGTCGTGGCATTG 5574 Query 260329 ATACTATCCAAGCTGTCACCAACGTTTAGTACTACACAAGAGCTAAACTGACGTGTATTT 260388 || || |||| |||||| || | | | || |||||||| ||||| || || | Sbjct 5573 ATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTGGCGAGTGGGT 5514 Query 260389 GTACGTAGACCAGCCATAATAGGCGTAGG 260417 || || | |||||||| || ||||| || Sbjct 5513 GTGCGCACGCCAGCCATGATGGGCGTGGG 5485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113723225150480