Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4924 91.5 1e-13 seq6434 86.0 5e-12 >seq4924 Length=20857 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/183 (71%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41048 GATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTC 41107 ||||||||||||||| || ||| | |||||||| || || || | || |||||||| Sbjct 331 GATGGCATTGCCACCGTGCCATACCATGTGTCAGTTCTATGTAAGCGACGGGGAACTGTC 390 Query 41108 ATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAG 41167 |||||| | || || | || || || |||| || || || || || ||||| || || Sbjct 391 GTGTCAACTATACCAGCGTTCCGGCGATATGGCCCTTGGAGTGCCCTTCAACATCGCCAG 450 Query 41168 TTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAATTTGT 41227 |||| ||| ||||| | ||||| || || || || ||||| ||||| ||||| Sbjct 451 CTATGGTCTCCTCACTCACATGATCGCGCATGTGACTGGCTTAAA----GGTGAGTTTGT 506 Query 41228 TCA 41230 || Sbjct 507 CCA 509 >seq6434 Length=27939 Score = 86.0 bits (94), Expect = 5e-12 Identities = 120/167 (72%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 19549 TTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTG-T 19607 |||||||| || || | || ||| | ||||| ||||| ||||| | || ||| | | Sbjct 14653 TTGCACATGATCATCTTCGACGAAATCGACGCGATCTGCAAGCAGCGTGGATCTATGGCT 14594 Query 19608 AAAT-----GGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTT 19662 || || || |||||||| || ||||||||||| ||||| || | |||||||| Sbjct 14593 GGATCGTCCGGCGTCCATGACACCGTCGTCAATCAACTTCTGTCGAAGATGGACGGTGTG 14534 Query 19663 AACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709 | |||||||| || || | |||||||| ||||| || || | ||| Sbjct 14533 GAACAACTGAACAACATCCTTGTTATTGGAATGACCAACAGGCGGGA 14487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397419621597550