Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq5063 107 2e-18
seq2066 107 2e-18
seq4834 93.3 4e-14
>seq5063
Length=4177
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
||||| || || || || ||||||||| | |||| | || ||||| || || |||
Sbjct 2241 GTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGTTGCTTTCCG 2300
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || | ||||||||||| || || | || ||||| || ||||||| ||
Sbjct 2301 GCGAAGATCAAGCGCTGTTGATCTGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCCTTG 2360
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||| | |||||| ||||| || || || | ||||| || |||||
Sbjct 2361 ACGTTCTCGATCGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTCTTGCCGGTGAGAGTC 2420
Query 27231 TTCACAAAGATTTGCAT 27247
|||||||||||||||||
Sbjct 2421 TTCACAAAGATTTGCAT 2437
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || |||||||| || | |||| | || ||||| || || |||
Sbjct 2617 GTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTCGAGTTGCTTTCCG 2676
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || | |||||||||||| || || | || || || || ||||||| ||
Sbjct 2677 GCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTG 2736
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||| | |||||| ||||| || || || | ||||| ||||| ||
Sbjct 2737 ACGTTCTCGATGGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTCTTGCCGGTCAGGGTC 2796
Query 27231 TTCACAAAGATTTGCAT 27247
||||| |||||||||||
Sbjct 2797 TTCACGAAGATTTGCAT 2813
>seq2066
Length=2850
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || |||||||| | | | || ||||||||||||| || |||
Sbjct 874 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGTCCGTCTTCGAGCTGCTTTCCG 933
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | ||||| || || ||||| || || | ||||| || || ||||||| ||
Sbjct 934 GCGAAGATGAGGCGTTGCTGATCTGGGGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTG 993
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||| | |||||| ||||| ||||| || | ||||| ||||| ||
Sbjct 994 ACGTTCTCAATGGTGTCGGAGGCTTCGACTTCGAGAGTGATCGTCTTGCCGGTCAGGGTC 1053
Query 27231 TTCACAAAGATTTGCAT 27247
||||| ||||| |||||
Sbjct 1054 TTCACGAAGATCTGCAT 1070
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || ||||| || |||||||| || |||| | || |||||||| || |||
Sbjct 1463 GTCGATTCCTTTTGGATGTTGTAGTCCGACAATGTGCGGCCATCCTCGAGCTGCTTTCCG 1522
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | ||||| ||||||||||| || || | || || || || ||||||| ||
Sbjct 1523 GCGAAGATGAGGCGCTGTTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 1582
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||| | |||||| ||||| || || || | |||||||||| ||
Sbjct 1583 ACGTTCTCGATGGTGTCCGAGGCTTCGACTTCGAGGGTGATCGTCTTGCCCGTCAAGGTC 1642
Query 27231 TTCACAAAGATTTGCAT 27247
||||| ||||| |||||
Sbjct 1643 TTCACGAAGATCTGCAT 1659
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || || || || || |||||||| || | |||| | || |||
Sbjct 1946 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTCG 2005
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|| || || |||||| | || | |||||||||||| || || | || || || || |
Sbjct 2006 AGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTGTCCTGG 2065
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| || | | | || | ||||| | |||||| ||||| || || || | |||
Sbjct 2066 ATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGGCTTCGACTTCGAGGGTGATCGTCTTG 2125
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||||||| || ||||| ||||| |||||
Sbjct 2126 CCCGTCAAGGTCTTCACGAAGATCTGCAT 2154
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
||||| || || || || |||||||| | | | || ||||||||||||| || |||
Sbjct 1235 GTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGTCCGTCTTCGAGCTGCTTTCCG 1294
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | ||||| || || ||||| || || | ||||| || || ||||||| ||
Sbjct 1295 GCGAAGATGAGGCGTTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTG 1354
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | || || | || || ||||| || || || | ||||| ||||| ||
Sbjct 1355 ACGTTCTCGATGGTATCCGAAGCCTCCACTTCGAGGGTGATCGTCTTGCCGGTCAGGGTC 1414
Query 27231 TTCACAAAGATTTGCAT 27247
||||| |||||||||||
Sbjct 1415 TTCACGAAGATTTGCAT 1431
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || || || || || |||||||| | |||| | || |||
Sbjct 2 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCG 61
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|| || || |||||| | ||||| ||||||||||| || || | || || || ||
Sbjct 62 AGTTGCTTTCCGGCGAAGATGAGGCGCTGTTGATCTGGGGGAATGCCTTCCTTGTCTTGA 121
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| || | | || | ||||| | ||||| ||||| |||||||| | |||
Sbjct 122 ATCTTCGCCTTGACATTCTCAATGGTGTCAGAAGCTTCGACTTCGAGAGTTATCGTCTTG 181
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| |||| || ||||| |||||||||||
Sbjct 182 CCAGTCAAGGTCTTCACGAAGATTTGCAT 210
>seq4834
Length=88581
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||||| || || ||||| |||||||| | | || |||| ||
Sbjct 21131 ACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGAAAGAGTACGGCCGTCCTCA 21190
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
|||||||| ||||| | ||||| |||||||| || || || | || || |||||
Sbjct 21191 AGCTGTTTTCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCTTCCTTATCTTGA 21250
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| |||| | | || | ||||| | ||||| ||||| || || || | ||
Sbjct 21251 ATCTTCGCCTTCACGTTCTCGATTGTGTCCGAAGCTTCGACTTCGAGGGTGATGGTCTTT 21310
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || || ||||||||||||||
Sbjct 21311 CCGGTGAGCGTCTTGACAAAGATTTGCAT 21339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424895506551120
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