Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq5910 105 2e-18 seq5432 89.7 1e-13 >seq5910 Length=978 Score = 105 bits (116), Expect = 2e-18 Identities = 184/265 (69%), Gaps = 6/265 (2%) Strand=Plus/Minus Query 9138 ATTGCGCCCAGGCTCACCAGGTTGCGCAGGTACGCGTTCACGCCTTCAATCACGTCATTG 9197 || |||||| || | |||| ||||| | |||| | || |||||| ||||||| ||| Sbjct 645 ATCGCGCCCTGGGCCTTGAGGTCGCGCATGAACGCCTGCAGGCCTTCGGTCACGTCCTTG 586 Query 9198 ACGTATTGTTTGGTGATGCCACGGTCTACGGCCCACAGGTGTGCACGCAGCAGACT---G 9254 ||||| |||||| |||||| || ||||| ||||| || || ||| | | Sbjct 585 ACGTAGGTGGCGGTGATCGAACGGTCGACTGCCCATT--TGTGCCCGTAG-AGAATCGCG 529 Query 9255 TCATTGATGATGTCAGCCGTGCGAACCACGCACAGGAACGCCCATTTCTGATCGCTGGAA 9314 || | | |||||| ||||| || | | ||| ||||| ||| | |||||| Sbjct 528 TCCATCACGATGTCCATGGTGCGCACGCGGGTGACGAAGGCCCACTTCGGGTCGCTGCTC 469 Query 9315 CAGGTGCGGTTGCCCCACAGGCGGAAACCGTCCTGGCGAATGATGGTGGTGACTTCGTTT 9374 ||||||||||||||||||||| | ||||| | ||| ||||||||||||| | | Sbjct 468 AGGGTGCGGTTGCCCCACAGGCGATAGCCGTCATCGCGGATGATGGTGGTGATGTTGGCG 409 Query 9375 TCATTCAGCAGGTTTGCACGGCTGG 9399 | || |||||||| || |||| || Sbjct 408 TTGTTGAGCAGGTTGGCGCGGCAGG 384 >seq5432 Length=1936 Score = 89.7 bits (98), Expect = 1e-13 Identities = 184/273 (67%), Gaps = 3/273 (1%) Strand=Plus/Minus Query 41199 GGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCATC 41258 ||| | || || ||| | || || |||| | |||| |||||| | || || ||| | Sbjct 451 GGCCAGGACCCTGAAGTTCGCCACCTGCCCAACGGCAACGCGGTGACCAACCTCAGCCTG 392 Query 41259 GCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAATGG 41318 ||||| | || |||| || || |||||| ||||| || | || || ||| Sbjct 391 GCCACCAGCGAGCAGTGGACCGACAAGCAGACCGGCCAGAAGGTCGAGCGTACCGAGTGG 332 Query 41319 CACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACCTGCGCAAAGGT 41378 ||||| ||| || ||||| ||| | || || ||||| |||| ||||||||||| ||| Sbjct 331 CACCGTGTTTCGATGTTCGGCAAGGTTGCCGAGATTGCCGGCGAGTACCTGCGCAAGGGT 272 Query 41379 AGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGACCAGGCTGGCGTT 41438 |||||| ||| || |||| |||| || || | || ||| ||| ||| | Sbjct 271 TCGCAGGTGTACATCGAGGGCAAGCTGCAGACCCGCGAGTG---GGAAAAGGACGGCATC 215 Query 41439 GATCGCTACACCACTGAAATCAACGTGGGCATG 41471 | || |||||||| || |||| ||| | |||| Sbjct 214 AAGCGTTACACCACCGAGATCATCGTCGACATG 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133197720201360