Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq6629 93.3 5e-14 seq7237 86.0 8e-12 >seq6629 Length=171283 Score = 93.3 bits (102), Expect = 5e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 181802 AGCGTCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAAT 181861 || ||| || || ||| |||||||||||| || ||||| || ||| | ||| || Sbjct 31028 AGAGTCCTTTCCTCCCTGGAGACGCGTACCGAACTGACCGATGGGGAGAAGCAAGTTGAT 30969 Query 181862 GTTGTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCCGCAAGGGACACTTC 181921 |||||| || || ||||| | ||||| ||||| ||||| | ||||||| ||| Sbjct 30968 GTTGTTGGATCCAACGTAGTCCTGAGCCAAGTTAACAATGGTCATCATAAGGGACTGTTC 30909 Query 181922 ACCGTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCA 181977 ||||||||||| || ||| | || |||| | |||||||| |||||||||| Sbjct 30908 TCCGTGGTGGTAGGCGGACATCTCGCCAACGGCACCAGCCAACTGGGCCACCTTCA 30853 >seq7237 Length=102105 Score = 86.0 bits (94), Expect = 8e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| | ||| |||||||| | ||||| ||||| ||||| | Sbjct 85373 ATCTCGGTGCAGAGGTTGGAGCACTTGATCGTCCCGAGGTTCTTCTGGTTGGACTTCTGG 85432 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| || ||||||||||||||||| || || || || || |||| || ||| || Sbjct 85433 TTGCAGGCGTCCTTGTAGAGCATGTAAGGAGTGCCGGTTTCGATCTGCGACGTGACGATC 85492 Query 111410 GCCTTCCAAA 111419 ||| ||||| Sbjct 85493 TCCTCCCAAA 85502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627973043496000