Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq6629 93.3 5e-14
seq7237 86.0 8e-12
>seq6629
Length=171283
Score = 93.3 bits (102), Expect = 5e-14
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 181802 AGCGTCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAAT 181861
|| ||| || || ||| |||||||||||| || ||||| || ||| | ||| ||
Sbjct 31028 AGAGTCCTTTCCTCCCTGGAGACGCGTACCGAACTGACCGATGGGGAGAAGCAAGTTGAT 30969
Query 181862 GTTGTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCCGCAAGGGACACTTC 181921
|||||| || || ||||| | ||||| ||||| ||||| | ||||||| |||
Sbjct 30968 GTTGTTGGATCCAACGTAGTCCTGAGCCAAGTTAACAATGGTCATCATAAGGGACTGTTC 30909
Query 181922 ACCGTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCA 181977
||||||||||| || ||| | || |||| | |||||||| ||||||||||
Sbjct 30908 TCCGTGGTGGTAGGCGGACATCTCGCCAACGGCACCAGCCAACTGGGCCACCTTCA 30853
>seq7237
Length=102105
Score = 86.0 bits (94), Expect = 8e-12
Identities = 97/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349
|| || || || | |||||| | ||| |||||||| | ||||| ||||| ||||| |
Sbjct 85373 ATCTCGGTGCAGAGGTTGGAGCACTTGATCGTCCCGAGGTTCTTCTGGTTGGACTTCTGG 85432
Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409
||||| || ||||||||||||||||| || || || || || |||| || ||| ||
Sbjct 85433 TTGCAGGCGTCCTTGTAGAGCATGTAAGGAGTGCCGGTTTCGATCTGCGACGTGACGATC 85492
Query 111410 GCCTTCCAAA 111419
||| |||||
Sbjct 85493 TCCTCCCAAA 85502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627973043496000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |