Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq4628 127 3e-24
seq7237 91.5 2e-13
>seq4628
Length=2726
Score = 127 bits (140), Expect = 3e-24
Identities = 354/530 (67%), Gaps = 16/530 (3%)
Strand=Plus/Plus
Query 13906 CTCATTGAGGAGGTTCGCCAAGTCGGCACCAGAGAAGCCCGTCGTTTGCTTTGCGATGGC 13965
||| |||| ||||| |||| ||||||||| |||||||| | ||| ||||| |
Sbjct 1357 CTCGTTGACCAGGTTGGCCAGGTCGGCACCGGAGAAGCCGGGCGTACCACGGGCGATCAC 1416
Query 13966 GTGTAGCTTCACATCGTCAGCCAACTTCTTGTCTCGGGCGTGGACACCC--AAAATCTTC 14023
| | ||||| | ||| | | | | |||| | || || |||| | ||||| |
Sbjct 1417 GGCAGGGTTCACGTTGTCGCCGATCGGC--GTCTTGCGCATGTGCACCTTGAGAATCTGC 1474
Query 14024 TCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGACCTGGGCGG 14083
|||||||| || | ||| ||| |||| | | || || || || ||||| ||
Sbjct 1475 TCGCGACCACGGATGTCGGGCAGGCCCACGACCACTTGGCGGTCGAAACGGCCTGGACGC 1534
Query 14084 AGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTC 14143
|| | || |||||| | || ||||| || || ||||| || | |||||| |||
Sbjct 1535 AGCAACGCAGGGTCAAGCACGTCCGGACGGTTGGTAGCGGCGATCACGATGATGCC-GTC 1593
Query 14144 --TCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCAT 14201
|| || || ||||| |||||||| || | || |||| ||| || ||||| || |
Sbjct 1594 GTTCATT-TCGAAGCCGTCCATCTCCACCAGCAACTGGTTGAGGGTCTGCTCGCGCTCGT 1652
Query 14202 CATTCGCAGGCATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGAT 14259
||| || | ||| || || | || || |||||||||||| ||||| |||||
Sbjct 1653 CATGACCA--CCGCCCATGCCGGCGCCACGGTGGCGACCGACGGCGTCGATTTCGTCGAT 1710
Query 14260 GAAAACGATACATGGTTGATT-TTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGG 14318
||| | ||| || || | ||| || | || | || || || || || | |||
Sbjct 1711 GAAGATGATGCACGGCGCGTGCTTCTTGGCCTGCT-CGAACATGTCACGTACACGGCTGG 1769
Query 14319 CACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACG 14377
||||||||||||| ||||| || || || | || ||||| || | || ||| || ||
Sbjct 1770 CACCGACACCCACGAACATTTCAACGAAGTCGGAACCGGAA-ATGGTGAAGAACGGCACC 1828
Query 14378 TTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 14427
|| | |||||||||||||| ||| || |||||||| || || || ||
Sbjct 1829 TTGGCCTCACCCGCGATGGCCTTGGCCAGCAGGGTCTTACCGGTACCGGG 1878
>seq7237
Length=102105
Score = 91.5 bits (100), Expect = 2e-13
Identities = 209/315 (66%), Gaps = 0/315 (0%)
Strand=Plus/Plus
Query 119310 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCA 119369
|| || || || || |||| ||||| | ||||||| | ||| | | |||| ||
Sbjct 86017 CCGATTCCGCCGGCGGACTTGGAGATCAGAGCGCACTGCCAGAGGGTCTTGAAGATGCCG 86076
Query 119370 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTA 119429
||||| ||||| | | | | || ||||||||| ||| || ||| || ||
Sbjct 86077 TCGATGGAGTCGTCACTCATGGTGAGCAGGAAGCAGGAGCTCATCTGGGGCTTGCAGGTG 86136
Query 119430 CCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAG 119489
|| ||||||||||| || || | || ||| ||||| | | |||||| || ||||
Sbjct 86137 CCGGCGTTGAAGAGCGTCGGCGAGGCATGGGTGAACCACCGCTCGGACATGAGGTTGTAG 86196
Query 119490 GTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATG 119549
|| || | | ||||| ||||||||| ||| || |||| | || ||||| | |||
Sbjct 86197 GTTTCGATGGCGGCGTTGATGTCTTCCTTGTGGATTCCGACGGCCACGCGCATCAGCATA 86256
Query 119550 TATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTC 119609
| ||||||| ||||| | | || |||| | | ||||||| ||||| ||||
Sbjct 86257 TGTTGGGGTCGTTCCACGACCTTCCCGTCGATCTTGAGGAGGTAGGAGCGCTCCAGGGTC 86316
Query 119610 TTGAGACCAAAATAG 119624
|||| || || |||
Sbjct 86317 TTGAAGCCGAAGTAG 86331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618377144395600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |