Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq7237 96.9 4e-15
seq2592 87.8 2e-12
>seq7237
Length=102105
Score = 96.9 bits (106), Expect = 4e-15
Identities = 167/239 (70%), Gaps = 14/239 (6%)
Strand=Plus/Minus
Query 104610 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 104669
|||| |||| | ||||||||||||||||| ||| | |||||||| |||||| |
Sbjct 85827 TCGCCATCTACATCGAGCCATGGCACGCGGACATCTTCGAGTTCCT------GCGTCTGA 85774
Query 104670 ACC--AA----GGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTC 104723
| || || ||||||| ||| ||||||||||||| || |||||||| |
Sbjct 85773 AGAGGAACACCGGATCGGAGGAGGAGCGCGCTCGCGATCTCTTCTACGGGCTCTGGATCC 85714
Query 104724 CAGATCTCTTCATGAAGAGAGTTGAGGA-GAGTGGCAATTGGTCTCTCTTTTGTCCAGAC 104782
| || | |||||| || | || |||| || | | ||||| ||| | ||||| ||
Sbjct 85713 CCGACTTGTTCATGGAGCGTGTCAAGGACGACAAG-GAGTGGTCCCTCATGTGTCCGCAC 85655
Query 104783 AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTA 104841
||| ||||| ||| ||| ||| || ||||||| ||||| |||||||| |||||
Sbjct 85654 AAGTGCCCTGGACTCCACGACGCCTACGGAAAGGAGTTCGAAGCACTTTACACGAAGTA 85596
>seq2592
Length=18905
Score = 87.8 bits (96), Expect = 2e-12
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887
|| || || ||||||||||| || |||||| ||| || | |||||||||||||| ||
Sbjct 15178 GTGGAAGGCATCTTCTTCTCCGGATCCTTCGCCGCCATCTTCTGGCTCAAGAAGCGCGGC 15119
Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACC 94945
|| ||||| || ||| | | |||||| || ||||| || ||||| || |||||||
Sbjct 15118 CTGATGCCCGGCCTCACCCACAGCAACGAACTCATCTCCCGGGACGAAGGCCTCCACC 15061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583206046392400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |