Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq7237 96.9 4e-15 seq2592 87.8 2e-12 >seq7237 Length=102105 Score = 96.9 bits (106), Expect = 4e-15 Identities = 167/239 (70%), Gaps = 14/239 (6%) Strand=Plus/Minus Query 104610 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 104669 |||| |||| | ||||||||||||||||| ||| | |||||||| |||||| | Sbjct 85827 TCGCCATCTACATCGAGCCATGGCACGCGGACATCTTCGAGTTCCT------GCGTCTGA 85774 Query 104670 ACC--AA----GGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTC 104723 | || || ||||||| ||| ||||||||||||| || |||||||| | Sbjct 85773 AGAGGAACACCGGATCGGAGGAGGAGCGCGCTCGCGATCTCTTCTACGGGCTCTGGATCC 85714 Query 104724 CAGATCTCTTCATGAAGAGAGTTGAGGA-GAGTGGCAATTGGTCTCTCTTTTGTCCAGAC 104782 | || | |||||| || | || |||| || | | ||||| ||| | ||||| || Sbjct 85713 CCGACTTGTTCATGGAGCGTGTCAAGGACGACAAG-GAGTGGTCCCTCATGTGTCCGCAC 85655 Query 104783 AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTA 104841 ||| ||||| ||| ||| ||| || ||||||| ||||| |||||||| ||||| Sbjct 85654 AAGTGCCCTGGACTCCACGACGCCTACGGAAAGGAGTTCGAAGCACTTTACACGAAGTA 85596 >seq2592 Length=18905 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || || || ||||||||||| || |||||| ||| || | |||||||||||||| || Sbjct 15178 GTGGAAGGCATCTTCTTCTCCGGATCCTTCGCCGCCATCTTCTGGCTCAAGAAGCGCGGC 15119 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACC 94945 || ||||| || ||| | | |||||| || ||||| || ||||| || ||||||| Sbjct 15118 CTGATGCCCGGCCTCACCCACAGCAACGAACTCATCTCCCGGGACGAAGGCCTCCACC 15061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583206046392400