Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq4834 143 8e-29
seq2066 140 1e-27
seq5063 136 1e-26
seq71 122 3e-22
seq6307 93.3 1e-13
seq48 87.8 5e-12
seq6645 86.0 2e-11
>seq4834
Length=88581
Score = 143 bits (158), Expect = 8e-29
Identities = 172/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563
||| || |||||||| | | || || | || ||||||||||| || ||||| || ||
Sbjct 21106 TTAAATTCCACCACGAAGACGGAGGACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTA 21165
Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623
|| || | || || || || ||||| |||||||| |||||||| || || || || ||
Sbjct 21166 GTCTGAAAGAGTACGGCCGTCCTCAAGCTGTTTTCCGGCAAAGATGAGGCGCTGTTGGTC 21225
Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683
||||| || ||||| ||||| ||||| || || || || || || || | || || |
Sbjct 21226 GGGAGGGATGCCTTCCTTATCTTGAATCTTCGCCTTCACGTTCTCGATTGTGTCCGAAGC 21285
Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| ||||| || || | ||||||||||| || || || ||||| || |||||
Sbjct 21286 TTCGACTTCGAGGGTGATGGTCTTTCCGGTGAGCGTCTTGACAAAGATTTGCAT 21339
Score = 111 bits (122), Expect = 5e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | ||| ||||||||||| || || || || || ||
Sbjct 21701 CATACCACCACGAAGACGGAGTACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 21760
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| || |||| ||||||||||| || ||||| || || || || || ||||| |||||
Sbjct 21761 GGACAAAGTTCTGCCATCTTCAAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCAGG 21820
Query 140627 AGGAATTCCTTCTTTATCCTGAAT 140650
||| || ||||| ||||| |||||
Sbjct 21821 AGGGATGCCTTCCTTATCTTGAAT 21844
Score = 100 bits (110), Expect = 9e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| || || ||||| || || ||||| || ||||| || ||||| || |||||||| |||
Sbjct 22924 TTACCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCTTA 22983
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
|| || || || || || | || || | ||||| ||||| || | |||||||||||
Sbjct 22984 GCCTTGACGTTTTCGATGGTGTCGGACGCCTCAACCTCAAGGGTGATGGTCTTTCCGGTA 23043
Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || || ||||||||
Sbjct 23044 AGAGTTTTGACGAAGATCTGCAT 23066
>seq2066
Length=2850
Score = 140 bits (154), Expect = 1e-27
Identities = 172/235 (73%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||| ||||| || | || ||||| || ||||| || ||||| || || || || |
Sbjct 836 TTTGCATTCCACCGCGAAGTCGAAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGT 895
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | ||||| || ||||| || || ||||| || ||||| || ||||||||||
Sbjct 896 AGTCCGAGAGGGTTCGTCCGTCTTCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGAT 955
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || || ||||| || || || || || || || || || || ||||| | || || |
Sbjct 956 CTGGGGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGGAGG 1015
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| ||||| || || | ||||| ||||| || || || || || ||||||||
Sbjct 1016 CTTCGACTTCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1070
Score = 132 bits (146), Expect = 1e-25
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|| ||||| | || || || || ||||||||||| || || || || || || || ||
Sbjct 1205 CCTCCACGGAGTCGAAGGACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAG 1264
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| ||||| || ||||| || || ||||| || ||||| || ||||||||||| || ||
Sbjct 1265 AGGGTTCGTCCGTCTTCGAGCTGCTTTCCGGCGAAGATGAGGCGTTGCTGATCTGGGGGG 1324
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
||||| || || ||||| || || || || || || || || | ||| || | || |||
Sbjct 1325 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCCGAAGCCTCCACT 1384
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|| || || | ||||| ||||| || || || || || || ||||||
Sbjct 1385 TCGAGGGTGATCGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATT 1432
Score = 120 bits (132), Expect = 9e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| |||||||| | | ||||| | || || || ||||| || || || || || ||
Sbjct 1924 CATTCCACCACGGAGACGGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 1983
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| || ||||| ||||| || ||||| | ||| || ||||| ||
Sbjct 1984 CGACAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGG 2043
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||||||||| || ||||| || || || || || || || || | || || | |||
Sbjct 2044 GGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGGCTTC 2103
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || || | ||||| || || | || || || || ||||||||
Sbjct 2104 GACTTCGAGGGTGATCGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2154
>seq5063
Length=4177
Score = 136 bits (150), Expect = 1e-26
Identities = 141/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
||||| || |||||||| ||||| || || || || || || || | || ||||| |||
Sbjct 1683 AGAACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCGTCT 1742
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || ||||||||||| || || |||||||| || || ||||| || || |||
Sbjct 1743 TCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGTGGGATTCCCTCCTTGTCC 1802
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
||||| || || || ||||| ||||| | || || | ||| |||||||| || | |||
Sbjct 1803 TGAATCTTGGCCTTCACATTTTCAATGGTGTCCGAGGCTTCGACTTCAAGAGTGATGGTC 1862
Query 140706 TTTCC 140710
|||||
Sbjct 1863 TTTCC 1867
Score = 136 bits (150), Expect = 1e-26
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
||||| || || || |||||||| || || || || || || || | || || |||||
Sbjct 2226 AGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 2285
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| ||||| ||||| || ||||| | || || ||||| || |||||||||||||| |||
Sbjct 2286 TCGAGTTGCTTTCCGGCGAAGATCAAGCGCTGTTGATCTGGGGGAATTCCTTCTTTGTCC 2345
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || || || || |||| || || | ||| ||||| || || | |||
Sbjct 2346 TGGATCTTGGCCTTGACGTTCTCGATCGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTC 2405
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|| ||||| || || || ||||| || ||||||
Sbjct 2406 TTGCCGGTGAGAGTCTTCACAAAGATTTGCATT 2438
Score = 122 bits (134), Expect = 3e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || || |||||||| || || || || || || || || || | || || |||||
Sbjct 2602 AGCACCAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCC 2661
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| ||||| ||||| || ||||| | ||| || ||||| || ||||||||||| || |||
Sbjct 2662 TCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTGTCC 2721
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || || || || || || | || || | ||| ||||| || || | |||
Sbjct 2722 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAGGCTTCGACTTCGAGGGTGATCGTC 2781
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || || || || || || |||||
Sbjct 2782 TTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 2813
>seq71
Length=89762
Score = 122 bits (134), Expect = 3e-22
Identities = 241/356 (68%), Gaps = 3/356 (1%)
Strand=Plus/Plus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
||||||||| | || | |||||| | | || ||||||||||| |||||| | ||| |
Sbjct 9700 CCCGAAGAAGTGTCTGCCATGGTTCTTGGAAAGATGAAGGAAATCGCTGAATCGTATCTC 9759
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|| | ||| | | || ||| | ||||| || || || || || ||||||||||||
Sbjct 9760 GGAAAGGAAGTCAAGCACGCCGTTGTCACTGTGCCTGCTTACTTCAACGATGCCCAGCGT 9819
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || ||||| || |||||| || || || ||| | | || || || |||
Sbjct 9820 CAGGCCACCAAGGATGCCGGTGTCATTGCTGGTTTGAACGTTGTTCGTATCATCAACGAA 9879
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771
|| || ||||| || ||||| || || ||||| || || ||| ||| || ||
Sbjct 9880 CCTACCGCTGCCGCTATTGCCTACGGCCTTGACAA---GAAGGACGGAGAGCGCAACATC 9936
Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831
|| | || ||||| || |||||||| || || || || || || || | || | |||
Sbjct 9937 CTCGTGTTCGATTTGGGAGGTGGTACCTTCGACGTCTCTCTCCTCACGATCGACAATGGA 9996
Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887
| || || ||| || || || ||||| || | ||||| ||||| || ||
Sbjct 9997 GTCTTCGAGGTTCTTGCTACCAACGGAGATACTCACTTGGGTGGCGAAGACTTCGA 10052
>seq6307
Length=70653
Score = 93.3 bits (102), Expect = 1e-13
Identities = 220/330 (67%), Gaps = 2/330 (1%)
Strand=Plus/Minus
Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621
|| |||||||||| ||| || || | | ||| | || | || ||||| || ||
Sbjct 14820 AAGATGAAGGAAACTGCCGAGGCCTTCCTGGGTAGCATTGTCAAGGACGCTGTCATCACC 14761
Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681
|| || ||||| || || || ||||||| || || || || || || ||||||
Sbjct 14760 GTGCCCGCCTACTTCAACGACAGCCAGCGTCAGGCCACCAAGGACGCCGGTGCCATTGCT 14701
Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741
|| | || ||||| |||| || || || || |||||||| || || || || || |
Sbjct 14700 GGTCTCAACGTTCTCCGAATCATCAACGAGCCGACTGCTGCCGCTATCGCGTACGGTTTG 14641
Query 349742 GATAAAATGAGTGACCA-AGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800
|| || | | | || ||| || | || || || ||| | || || ||||| ||
Sbjct 14640 GACAAGAAG-GCCACTGGAGAGCGCAACGTGCTCATCTTCGATCTTGGAGGCGGTACCTT 14582
Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGA 349860
||||| || | || || | || || ||||| || ||||| || | ||||| || ||
Sbjct 14581 CGATGTTTCCATCCTGACCATCGAGGACGGAATCTTCGAAGTCAAGTCTACTGCCGGAGA 14522
Query 349861 TACACATCTTGGTGGAGAAGATTTTGATAA 349890
|| ||||||||||| || || || || ||
Sbjct 14521 CACTCATCTTGGTGGTGAGGACTTCGACAA 14492
>seq48
Length=185442
Score = 87.8 bits (96), Expect = 5e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||||| ||||||||| | || || || || ||||||| || | ||| ||| ||
Sbjct 28848 GCTATTGGAATCGATCTGGGAACCACCTACAGCTGTGTTGGAGTGTACCAACATGGCCGA 28907
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || | |||||||||||||| |||| || ||||| || || || || |||||
Sbjct 28908 GTGGAGATCCTAGCAAATGATCAAGGCAACAAGACGACGCCGTCCTATGTCGCTTTTACA 28967
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCA 349356
||||||||||| | || || ||| | || || ||||
Sbjct 28968 GAAACTGAGCGCCTCATAGGAGATCCCGCTAAGGATCA 29005
>seq6645
Length=21841
Score = 86.0 bits (94), Expect = 2e-11
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| || || ||||| || || |||||||| || || || || || || || || || ||
Sbjct 8967 TTACCGGCGAAGATAAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCTTGGATCTTG 9026
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
|| || ||||| || |||| ||||| | || || || || || | ||||| || ||
Sbjct 9027 GCCTTCACATTCTCGATCGTGTCAGAGGCCTCGACCTCGAGCGTGATGGTCTTACCCGTG 9086
Query 140715 AGTGTTTTTACAAAAATCTGCATTA 140739
|| ||||| || |||||||||||||
Sbjct 9087 AGGGTTTTGACGAAAATCTGCATTA 9111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515108599380530
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