Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_028657.1
Length=60919
Score E
Sequences producing significant alignments: (Bits) Value
seq5432 226 1e-54
seq4015 91.5 6e-14
>seq5432
Length=1936
Score = 226 bits (250), Expect = 1e-54
Identities = 248/329 (75%), Gaps = 3/329 (1%)
Strand=Plus/Minus
Query 7279 GGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATG 7338
|| ||||||||||||||| |||| || | ||| ||||| ||| ||| || ||
Sbjct 484 GGGGTTAACAAAGTCATTTTGGTCGGCACTTGCGGCCAGGACCCTGAAGTTCGCCACCTG 425
Query 7339 CCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAG 7398
||||||||||| |||||||||||| ||| ||| |||||||||||| |||| ||||||
Sbjct 424 CCCAACGGCAACGCGGTGACCAACCTCAGCCTGGCCACCAGCGAGCAGTGGACCGACAAG 365
Query 7399 CAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTG 7458
|||||||||||| | || || |||||| ||||| || | | ||||| |
Sbjct 364 CAGACCGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTTTCGATGTTCGGCAAGGTT 305
Query 7459 GCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTG 7518
|| ||||| |||||||||||||||||||||||||| ||||| ||| |||| |||| |||
Sbjct 304 GCCGAGATTGCCGGCGAGTACCTGCGCAAGGGTTCGCAGGTGTACATCGAGGGCAAGCTG 245
Query 7519 CGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATCGTC 7578
| |||||| |||| || |||||||| | || |||||||||||| | ||||||
Sbjct 244 CAGACCCGCGAGTG---GGAAAAGGACGGCATCAAGCGTTACACCACCGAGATCATCGTC 188
Query 7579 GACATGCACGGACAGATGCAGATGCTTGG 7607
|||||||| || |||||| |||| ||
Sbjct 187 GACATGCAGGGCACCATGCAGCTGCTGGG 159
>seq4015
Length=3327
Score = 91.5 bits (100), Expect = 6e-14
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 53612 CCGTCCCGGTTCTTCCGGATCAGGATTTCGCCGATACCCTTCCTGTCGCTGTTCGGGAAA 53671
|||| || | ||| | ||| | ||| ||| |||| ||||| ||| | | |||
Sbjct 1174 CCGTTACGCTGCTTGCCGATGATGATCTCGGCGATGCCCTTGTGCTCGGTCTCGGGGTGG 1233
Query 53672 TAGACTTCATCGCGGTACACGAACATGACGATGTCGGCGTCTTGCTCAATGGCGCCGGAC 53731
|| || || ||||||||||||||||||| | ||||||||| ||||| || || || ||
Sbjct 1234 TACACCTCGTCGCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCACCCGAT 1293
Query 53732 TCGCGCAGGTCGCTGAGGACCGGACGCTTGTCGGGGCG 53769
|| |||| |||| | ||||| ||||||| ||||||
Sbjct 1294 TCACGCAAGTCGGAGTTCACCGGGCGCTTGTTGGGGCG 1331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194801825780220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |