Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq5432 226 1e-54 seq4015 91.5 6e-14 >seq5432 Length=1936 Score = 226 bits (250), Expect = 1e-54 Identities = 248/329 (75%), Gaps = 3/329 (1%) Strand=Plus/Minus Query 7279 GGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATG 7338 || ||||||||||||||| |||| || | ||| ||||| ||| ||| || || Sbjct 484 GGGGTTAACAAAGTCATTTTGGTCGGCACTTGCGGCCAGGACCCTGAAGTTCGCCACCTG 425 Query 7339 CCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAG 7398 ||||||||||| |||||||||||| ||| ||| |||||||||||| |||| |||||| Sbjct 424 CCCAACGGCAACGCGGTGACCAACCTCAGCCTGGCCACCAGCGAGCAGTGGACCGACAAG 365 Query 7399 CAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTG 7458 |||||||||||| | || || |||||| ||||| || | | ||||| | Sbjct 364 CAGACCGGCCAGAAGGTCGAGCGTACCGAGTGGCACCGTGTTTCGATGTTCGGCAAGGTT 305 Query 7459 GCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTG 7518 || ||||| |||||||||||||||||||||||||| ||||| ||| |||| |||| ||| Sbjct 304 GCCGAGATTGCCGGCGAGTACCTGCGCAAGGGTTCGCAGGTGTACATCGAGGGCAAGCTG 245 Query 7519 CGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATCGTC 7578 | |||||| |||| || |||||||| | || |||||||||||| | |||||| Sbjct 244 CAGACCCGCGAGTG---GGAAAAGGACGGCATCAAGCGTTACACCACCGAGATCATCGTC 188 Query 7579 GACATGCACGGACAGATGCAGATGCTTGG 7607 |||||||| || |||||| |||| || Sbjct 187 GACATGCAGGGCACCATGCAGCTGCTGGG 159 >seq4015 Length=3327 Score = 91.5 bits (100), Expect = 6e-14 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 53612 CCGTCCCGGTTCTTCCGGATCAGGATTTCGCCGATACCCTTCCTGTCGCTGTTCGGGAAA 53671 |||| || | ||| | ||| | ||| ||| |||| ||||| ||| | | ||| Sbjct 1174 CCGTTACGCTGCTTGCCGATGATGATCTCGGCGATGCCCTTGTGCTCGGTCTCGGGGTGG 1233 Query 53672 TAGACTTCATCGCGGTACACGAACATGACGATGTCGGCGTCTTGCTCAATGGCGCCGGAC 53731 || || || ||||||||||||||||||| | ||||||||| ||||| || || || || Sbjct 1234 TACACCTCGTCGCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCACCCGAT 1293 Query 53732 TCGCGCAGGTCGCTGAGGACCGGACGCTTGTCGGGGCG 53769 || |||| |||| | ||||| ||||||| |||||| Sbjct 1294 TCACGCAAGTCGGAGTTCACCGGGCGCTTGTTGGGGCG 1331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194801825780220