Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_028686.1
Length=166313
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 158 1e-33
>seq2257
Length=8409
Score = 158 bits (174), Expect = 1e-33
Identities = 286/415 (69%), Gaps = 10/415 (2%)
Strand=Plus/Minus
Query 128643 TTAATCTGAACACCATAATCTAAATGACGAATACGGTTTTCATCTACACCTTTGTTGTTC 128702
|| ||||||||||| || || || ||||||||||||||||| || ||||| |||||||
Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823
Query 128703 TTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAGTGTCGCCGCG 128762
|| || || || || |||| ||||||| |||||| || || ||| ||| || |||||
Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763
Query 128763 CCACCACGGACTCCGCCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTGCTTCCAGAAA 128822
|||||||| || |||||||| |||||||| || || || | ||||| ||| ||||
Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703
Query 128823 GGAATAACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCTTCTGCACGAATC 128882
|| | || || |||| ||||||| | ||||| ||| | || |||||
Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATG 5643
Query 128883 ATACCTGCATTAATACCAATACCTGCACGCTTACTGATGTATTTTGTAATTGACGCAGCA 128942
|| |||| ||||| ||||| ||||||| | ||| || || ||| |
Sbjct 5642 CGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAA-TGGCGCTG-- 5586
Query 128943 GCTTCGT-TAATTGA----ATTAAGACTATCACCGCCTTCAATAACCACGCATGAACTAA 128997
|||| ||||| | || || || | | ||| || | |||||| || || |
Sbjct 5585 --GTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGA 5528
Query 128998 ACTGACGTGTCGGAGTACGAACACCAGACATAATTGGAGTTGGCAATGAAATCTT 129052
|||| || || || || || || |||| ||| || || || ||||| ||||||||
Sbjct 5527 ACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCTT 5473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 532023651590800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |