Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq2257 158 1e-33 >seq2257 Length=8409 Score = 158 bits (174), Expect = 1e-33 Identities = 286/415 (69%), Gaps = 10/415 (2%) Strand=Plus/Minus Query 128643 TTAATCTGAACACCATAATCTAAATGACGAATACGGTTTTCATCTACACCTTTGTTGTTC 128702 || ||||||||||| || || || ||||||||||||||||| || ||||| ||||||| Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823 Query 128703 TTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAGTGTCGCCGCG 128762 || || || || || |||| ||||||| |||||| || || ||| ||| || ||||| Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763 Query 128763 CCACCACGGACTCCGCCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTGCTTCCAGAAA 128822 |||||||| || |||||||| |||||||| || || || | ||||| ||| |||| Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703 Query 128823 GGAATAACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCTTCTGCACGAATC 128882 || | || || |||| ||||||| | ||||| ||| | || ||||| Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATG 5643 Query 128883 ATACCTGCATTAATACCAATACCTGCACGCTTACTGATGTATTTTGTAATTGACGCAGCA 128942 || |||| ||||| ||||| ||||||| | ||| || || ||| | Sbjct 5642 CGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAA-TGGCGCTG-- 5586 Query 128943 GCTTCGT-TAATTGA----ATTAAGACTATCACCGCCTTCAATAACCACGCATGAACTAA 128997 |||| ||||| | || || || | | ||| || | |||||| || || | Sbjct 5585 --GTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGA 5528 Query 128998 ACTGACGTGTCGGAGTACGAACACCAGACATAATTGGAGTTGGCAATGAAATCTT 129052 |||| || || || || || || |||| ||| || || || ||||| |||||||| Sbjct 5527 ACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCTT 5473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532023651590800