Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq5893 91.5 4e-14 >seq5893 Length=2160 Score = 91.5 bits (100), Expect = 4e-14 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 16916 TAGCCCGTCGCCGGCACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTG 16975 |||||| || ||| | |||||| ||||||| || | || || |||||||| || | Sbjct 212 TAGCCCACCGTCGGTATCCATTCAGTCTTCAGGCTGCGAAATAACCGCTCCATCGGCGCG 271 Query 16976 TTATCCCAGCAGTTTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAAC 17035 || || |||||| || ||||||||||| |||||| ||| ||||||||||| ||| | Sbjct 272 TTGTCGTGGCAGTTGCCGCGCCGACTCATGCTCTGCGTGAAGCGGTATCTCCATAGTCTC 331 Query 17036 TGCCGGAA 17043 || ||||| Sbjct 332 TGGCGGAA 339 Score = 91.5 bits (100), Expect = 4e-14 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 39541 TAGCCCGTCGCCGGCACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCTG 39600 |||||| || ||| | |||||| ||||||| || | || || |||||||| || | Sbjct 212 TAGCCCACCGTCGGTATCCATTCAGTCTTCAGGCTGCGAAATAACCGCTCCATCGGCGCG 271 Query 39601 TTATCCCAGCAGTTTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACAGTAAC 39660 || || |||||| || ||||||||||| |||||| ||| ||||||||||| ||| | Sbjct 272 TTGTCGTGGCAGTTGCCGCGCCGACTCATGCTCTGCGTGAAGCGGTATCTCCATAGTCTC 331 Query 39661 TGCCGGAA 39668 || ||||| Sbjct 332 TGGCGGAA 339 Score = 86.0 bits (94), Expect = 2e-12 Identities = 214/321 (67%), Gaps = 12/321 (4%) Strand=Plus/Plus Query 16961 CGCTCCATTGGGCTGTTATCCCAGCAGTTTCCACGCCGACTCATACTCTGCCTGATCCGG 17020 |||||||| || |||||||||||||| || || || ||||| ||||| | || ||| Sbjct 402 CGCTCCATCGGCGCATTATCCCAGCAGTTGCCTCGGCGGCTCATGCTCTGGCGCATGCGG 461 Query 17021 TATCTCCACAGTAACTGCCGGAACTGCCTGCTCGTATAATGACTGCCTTGATCGCTGTGG 17080 || | ||||||| ||| |||||||| | || ||| || || || ||| ||| Sbjct 462 TAGCGCCACAGTCTCTGGCGGAACTGACGACTGCCATATTGCGATCCCTGGTCGGAGTGA 521 Query 17081 AACATCACCCCGACGGGCTTACCACGGGTTTCCCATGCCATTTCCAGTGCTTT---CATG 17137 |||| || ||| ||||| ||||| ||| | |||| ||||| ||||| || | Sbjct 522 AACAGCAGCCCTTGAGGCTTTCCACGTTGTTCGTAAGCCACGTCCAGCGCTTTGACCACG 581 Query 17138 GTAAGCCTGCTGTCCGGCGAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGG 17197 | | |||| || |||| || | ||||||||||| | | | ||| | || Sbjct 582 --AGGTCTGC-GTTCGGCTTTTCTGATAAAGCCCAGCCCACCACTCTGCGTGCATAGAGA 638 Query 17198 TCGAGAACAACGGCGAGGTACGCCCAGCGCTTACCC---GTCCAGATATAGGTCACATCA 17254 || || ||||| || || || ||| || ||| | ||| | || || | || Sbjct 639 TCCAGGACAACTGCCAGATAGTGCCA---TTTGCCCTGTGCCCAAACGTAAGTGATGTCG 695 Query 17255 CCGCACCACACCTGATTTGGC 17275 || ||||| |||||||||||| Sbjct 696 CCACACCAGACCTGATTTGGC 716 Score = 86.0 bits (94), Expect = 2e-12 Identities = 214/321 (67%), Gaps = 12/321 (4%) Strand=Plus/Plus Query 39586 CGCTCCATTGGGCTGTTATCCCAGCAGTTTCCACGCCGACTCATACTCTGCCTGATCCGG 39645 |||||||| || |||||||||||||| || || || ||||| ||||| | || ||| Sbjct 402 CGCTCCATCGGCGCATTATCCCAGCAGTTGCCTCGGCGGCTCATGCTCTGGCGCATGCGG 461 Query 39646 TATCTCCACAGTAACTGCCGGAACTGCCTGCTCGTATAATGACTGCCTTGATCGCTGTGG 39705 || | ||||||| ||| |||||||| | || ||| || || || ||| ||| Sbjct 462 TAGCGCCACAGTCTCTGGCGGAACTGACGACTGCCATATTGCGATCCCTGGTCGGAGTGA 521 Query 39706 AACATCACCCCGACGGGCTTACCACGGGTTTCCCATGCCATTTCCAGTGCTTT---CATG 39762 |||| || ||| ||||| ||||| ||| | |||| ||||| ||||| || | Sbjct 522 AACAGCAGCCCTTGAGGCTTTCCACGTTGTTCGTAAGCCACGTCCAGCGCTTTGACCACG 581 Query 39763 GTAAGCCTGCTGTCCGGCGAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGG 39822 | | |||| || |||| || | ||||||||||| | | | ||| | || Sbjct 582 --AGGTCTGC-GTTCGGCTTTTCTGATAAAGCCCAGCCCACCACTCTGCGTGCATAGAGA 638 Query 39823 TCGAGAACAACGGCGAGGTACGCCCAGCGCTTACCC---GTCCAGATATAGGTCACATCA 39879 || || ||||| || || || ||| || ||| | ||| | || || | || Sbjct 639 TCCAGGACAACTGCCAGATAGTGCCA---TTTGCCCTGTGCCCAAACGTAAGTGATGTCG 695 Query 39880 CCGCACCACACCTGATTTGGC 39900 || ||||| |||||||||||| Sbjct 696 CCACACCAGACCTGATTTGGC 716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132148213806000