Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_028829.1
Length=248088
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 156 7e-33
>seq2257
Length=8409
Score = 156 bits (172), Expect = 7e-33
Identities = 290/420 (69%), Gaps = 8/420 (2%)
Strand=Plus/Minus
Query 236241 CATCAATCGACTGAT-TGATACACTGTAGTCAAGATGACGAATACGGTTTTCTTCAACAC 236299
|| ||| || |||| ||| |||| |||||| | |||||||||||||||||||| ||||
Sbjct 5892 CAGCAAGCGGTTGATCTGA-ACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACAC 5834
Query 236300 CTTTGTTGTTCTTCAGAACTAACAGTTTTTCAACTTCTAAGTGCCAAATCGGGTAAGTTA 236359
| ||||||||||||||| | |||| |||| ||||| | |||||| || ||||| |
Sbjct 5833 CACGGTTGTTCTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACA 5774
Query 236360 GAGTCGCAGCACCACCACGTACACCACCTTGAGAACACGATTTAACCGCAGTTTGAAAGT 236419
|| || ||||||||||| || || ||||| || || || || ||||||| || ||
Sbjct 5773 AGGTTGCCGCACCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACA 5714
Query 236420 GTTTCCAGAATGGAATTACACCAGTGTGACGAATCTCACCTGAACGAA---CGACTGCCC 236476
|| |||| || | ||| ||||| | ||||| ||||| || ||| |
Sbjct 5713 TCTTGAAGAACGGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCG-CTG--C 5657
Query 236477 CTTCAGCACGAATCGCACCGCCATTCACACCGATACCTGCACGCTTACTAATGTAACTTA 236536
|| | || ||||| || ||||| | ||||||||| ||||||| | ||||| |
Sbjct 5656 CTACGGCGCGAATGCGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAA 5597
Query 236537 CAATTGATTTAGCCACTTCATTGATTGAATGCAAAGAGTCGCCTGATTCAATCTTAACAC 236596
|||| | | | | ||||||| | || |||| | |||| ||| || |
Sbjct 5596 CAATGGCGCTGGTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGC 5537
Query 236597 ACGAACTAAACTGGCGTGTCGGGGTACGAACGCCTGCCATAATCGGTGTCGGTAATGAAA 236656
| || || |||||||| || || || || ||||| ||||| || || || || || ||||
Sbjct 5536 AAGAGCTGAACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAA 5477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 793679086380800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |