Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_028829.1 Length=248088 Score E Sequences producing significant alignments: (Bits) Value seq2257 156 7e-33 >seq2257 Length=8409 Score = 156 bits (172), Expect = 7e-33 Identities = 290/420 (69%), Gaps = 8/420 (2%) Strand=Plus/Minus Query 236241 CATCAATCGACTGAT-TGATACACTGTAGTCAAGATGACGAATACGGTTTTCTTCAACAC 236299 || ||| || |||| ||| |||| |||||| | |||||||||||||||||||| |||| Sbjct 5892 CAGCAAGCGGTTGATCTGA-ACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACAC 5834 Query 236300 CTTTGTTGTTCTTCAGAACTAACAGTTTTTCAACTTCTAAGTGCCAAATCGGGTAAGTTA 236359 | ||||||||||||||| | |||| |||| ||||| | |||||| || ||||| | Sbjct 5833 CACGGTTGTTCTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACA 5774 Query 236360 GAGTCGCAGCACCACCACGTACACCACCTTGAGAACACGATTTAACCGCAGTTTGAAAGT 236419 || || ||||||||||| || || ||||| || || || || ||||||| || || Sbjct 5773 AGGTTGCCGCACCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACA 5714 Query 236420 GTTTCCAGAATGGAATTACACCAGTGTGACGAATCTCACCTGAACGAA---CGACTGCCC 236476 || |||| || | ||| ||||| | ||||| ||||| || ||| | Sbjct 5713 TCTTGAAGAACGGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCG-CTG--C 5657 Query 236477 CTTCAGCACGAATCGCACCGCCATTCACACCGATACCTGCACGCTTACTAATGTAACTTA 236536 || | || ||||| || ||||| | ||||||||| ||||||| | ||||| | Sbjct 5656 CTACGGCGCGAATGCGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAA 5597 Query 236537 CAATTGATTTAGCCACTTCATTGATTGAATGCAAAGAGTCGCCTGATTCAATCTTAACAC 236596 |||| | | | | ||||||| | || |||| | |||| ||| || | Sbjct 5596 CAATGGCGCTGGTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGC 5537 Query 236597 ACGAACTAAACTGGCGTGTCGGGGTACGAACGCCTGCCATAATCGGTGTCGGTAATGAAA 236656 | || || |||||||| || || || || ||||| ||||| || || || || || |||| Sbjct 5536 AAGAGCTGAACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAA 5477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793679086380800