Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_028847.1
Length=170527
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 116 4e-21
>seq2257
Length=8409
Score = 116 bits (128), Expect = 4e-21
Identities = 274/412 (67%), Gaps = 4/412 (1%)
Strand=Plus/Minus
Query 143920 GTTCATCTGGATTCCGTAGTCCATATGGCGAATACGGTTCTCATCGACACCTTTGTTGTT 143979
||| ||||| | |||||||||| || ||||||||||| || || ||||| ||||||
Sbjct 5883 GTTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTT 5824
Query 143980 TTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGG--ATAATAAGCAGTAGCA 144037
|||||||| ||||| |||| ||||||| ||||| || || | || ||| || ||
Sbjct 5823 CTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAG--GTTGCC 5766
Query 144038 GCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAG 144097
|| || ||||| | || ||||| || || || || || |||| |||||| || ||
Sbjct 5765 GCACCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAG 5706
Query 144098 AATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCACGA 144157
|| || | ||| || || | |||| || | ||| ||| | || |||
Sbjct 5705 AACGGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGA 5646
Query 144158 ATCATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTATTGAGTTA 144217
|| ||| | |||||||| ||||||||||| | || | ||| || || | | |
Sbjct 5645 ATGCGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTG 5586
Query 144218 GCAGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGAACTAAAT 144277
| || || || | ||| |||| | ||| || | ||| ||||| || ||
Sbjct 5585 GTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAAC 5526
Query 144278 TGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTAATGAAACCT 144329
|| || || ||||| || | |||||||| || || || || || |||| ||
Sbjct 5525 TGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCT 5474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545507185705200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |