Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_028847.1 Length=170527 Score E Sequences producing significant alignments: (Bits) Value seq2257 116 4e-21 >seq2257 Length=8409 Score = 116 bits (128), Expect = 4e-21 Identities = 274/412 (67%), Gaps = 4/412 (1%) Strand=Plus/Minus Query 143920 GTTCATCTGGATTCCGTAGTCCATATGGCGAATACGGTTCTCATCGACACCTTTGTTGTT 143979 ||| ||||| | |||||||||| || ||||||||||| || || ||||| |||||| Sbjct 5883 GTTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTT 5824 Query 143980 TTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGG--ATAATAAGCAGTAGCA 144037 |||||||| ||||| |||| ||||||| ||||| || || | || ||| || || Sbjct 5823 CTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAG--GTTGCC 5766 Query 144038 GCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAG 144097 || || ||||| | || ||||| || || || || || |||| |||||| || || Sbjct 5765 GCACCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAG 5706 Query 144098 AATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCACGA 144157 || || | ||| || || | |||| || | ||| ||| | || ||| Sbjct 5705 AACGGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGA 5646 Query 144158 ATCATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTATTGAGTTA 144217 || ||| | |||||||| ||||||||||| | || | ||| || || | | | Sbjct 5645 ATGCGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTG 5586 Query 144218 GCAGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGAACTAAAT 144277 | || || || | ||| |||| | ||| || | ||| ||||| || || Sbjct 5585 GTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAAC 5526 Query 144278 TGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTAATGAAACCT 144329 || || || ||||| || | |||||||| || || || || || |||| || Sbjct 5525 TGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCT 5474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545507185705200