Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_028881.1 Length=170473 Score E Sequences producing significant alignments: (Bits) Value seq2257 125 8e-24 >seq2257 Length=8409 Score = 125 bits (138), Expect = 8e-24 Identities = 276/412 (67%), Gaps = 4/412 (1%) Strand=Plus/Minus Query 142858 GTTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCAACGCCTTTGTTGTT 142917 ||| | ||| | |||||||||| |||||||||||||| || || || || |||||| Sbjct 5883 GTTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTT 5824 Query 142918 TTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGG--ATAATAAGCAGTAGCA 142975 |||||||| ||||| |||| ||||||| ||||| || || | || ||| || || Sbjct 5823 CTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAG--GTTGCC 5766 Query 142976 GCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACTGCAGTCTGGAAATGCTTCCAG 143035 || || ||||| | || ||||| || || || || || |||| |||||| ||| || Sbjct 5765 GCACCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAG 5706 Query 143036 AATGGAATAACACCGGTATGTTTGACTTCACCCATACCAATACGAGAACCTTCAGCACGA 143095 || || | ||| || |||| ||||||| || ||| ||| | || ||| Sbjct 5705 AACGGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGA 5646 Query 143096 ATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATATACTCGATTATTGAGTTA 143155 || ||| | |||||||| ||||| ||||| | || | || | || | | | Sbjct 5645 ATGCGGCCACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTG 5586 Query 143156 GCAGTTTTATTAATTGATTTCAGCGAGTCACCTGCTTCAATAACAACGCAAGAACTAAAC 143215 | || ||| || | ||| ||| | ||| || | |||||||| || ||| Sbjct 5585 GTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAAC 5526 Query 143216 TGACGGGTCGGGGTACGAGCACCAGCCATAATAGGAGTAGGCAATGAAATCT 143267 || || || || || || | |||||||| || || || ||||| ||||||| Sbjct 5525 TGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCT 5474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545334401926800