Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_028894.1
Length=170336
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 134 2e-26
>seq2257
Length=8409
Score = 134 bits (148), Expect = 2e-26
Identities = 296/437 (68%), Gaps = 10/437 (2%)
Strand=Plus/Minus
Query 140774 CTGGACACCATAGTCCATATGCCTGATACGGTTTTCTTCAACGCCTTTGTTGTTCTTCAG 140833
||| ||||| ||||||| || | |||||||||||||| || || ||||||||||||
Sbjct 5877 CTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTCTTCAG 5818
Query 140834 AACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTAGCAGCGCCG 140891
||| || | |||| ||||||| ||||| || || || | ||| || || || ||
Sbjct 5817 AACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAG--GTTGCCGCACCA 5760
Query 140892 CCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGA 140951
||||| | || ||||| || || || || || || | ||||| || |||||||
Sbjct 5759 CCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAACGGC 5700
Query 140952 ATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCGAA-CCTTCAGCACGAATCAT 141010
| ||| || || | ||||||| || || ||||| ||| | || |||||
Sbjct 5699 AGGCAACCCGTGTGTTGTGCTTCACCACCAC-GAATTTCGCTGCCTACGGCGCGAATGCG 5641
Query 141011 GCCAACGTTGATACCGATACCTGCACGCTTACTGATA--TATTCGATGATTGAATTAGCA 141068
|||| | |||||||||||||| ||||||| ||| | || | || | | |
Sbjct 5640 GCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATGGCGCTGGTC 5583
Query 141069 GTCTTATTGATTGACTTCAGGGAGTCAGCCGCTTCGATAACCACGCAGGAACTGAACTGT 141128
|| |||||| | |||| ||| | |||||| | |||||| || ||||||||
Sbjct 5582 GTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTGG 5523
Query 141129 CTTGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGAAACCTGTCGTGTAGAT 141188
| || ||||| | |||| |||||||| || |||||||| |||| || | |||
Sbjct 5522 CGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCTTGAATTGCGAT 5463
Query 141189 ACTGCATCATAAAAACG 141205
|| || || ||||| ||
Sbjct 5462 ACGGCGTCGTAAAAGCG 5446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 544896043081600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |