Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq3919 188 3e-43 >seq3919 Length=626 Score = 188 bits (208), Expect = 3e-43 Identities = 290/412 (70%), Gaps = 19/412 (5%) Strand=Plus/Plus Query 66590 GCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGAC 66649 ||| | || || || ||||| | || | ||| | | ||||||| || ||| |||| ||| Sbjct 29 GCCCAGGCACAAAAAGCCGGCGCCACCTGCGCATTCGTCGACGCCGAACACGCCCTCGAC 88 Query 66650 CCTGAGTACGCCAAGGC--GCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCCG 66707 || ||||||||| ||| ||| || || | ||||| |||| |||| ||||| | Sbjct 89 CCCGAGTACGCC--GGCAAGCTGGGCGTCAATGTCGACGACCTGCTGGTCTCGCAGCCGG 146 Query 66708 ATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGT------CAAGTCTGGCGAGC 66761 | ||||| |||||||||||||| ||| ||| | || || ||| | | ||| Sbjct 147 ACACCGGTGAGCAGGCCCTGGAAATCACCGACATGCTGGTGCGCTCCAACGCCGTCGACG 206 Query 66762 TGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCG 66821 || |||||||| ||||||||||||||||||| || |||||| ||||||||| Sbjct 207 TGATCATCGTCG------ACTCCGTGGCGGCCCTGGTACCCAAGGCCGAGATCGAAGGCG 260 Query 66822 ACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGC 66881 | || || |||| ||||| |||||||| || ||||| ||||| ||||| |||||||| Sbjct 261 AAATGGGCGACATGCACGTGGGCCTGCAGGCTCGCCTGATGTCCCAGGCACTGCGCAAGA 320 Query 66882 TCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGA 66941 |||| |||| |||| | | ||||| ||| | ||| |||||||| | ||| || Sbjct 321 TCACCGGCAACATCAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGATCCGCATGA 380 Query 66942 AGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGC 66993 | |||||| || | | ||||| || |||||||| || || || || Sbjct 381 AAATCGGCGTGATGTTCGGCAGCCCG---GAAACCACCACCGGTGGTAACGC 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242838571406340