Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_028906.1
Length=75933
Score E
Sequences producing significant alignments: (Bits) Value
seq3919 188 3e-43
>seq3919
Length=626
Score = 188 bits (208), Expect = 3e-43
Identities = 290/412 (70%), Gaps = 19/412 (5%)
Strand=Plus/Plus
Query 66590 GCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGAC 66649
||| | || || || ||||| | || | ||| | | ||||||| || ||| |||| |||
Sbjct 29 GCCCAGGCACAAAAAGCCGGCGCCACCTGCGCATTCGTCGACGCCGAACACGCCCTCGAC 88
Query 66650 CCTGAGTACGCCAAGGC--GCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCCG 66707
|| ||||||||| ||| ||| || || | ||||| |||| |||| ||||| |
Sbjct 89 CCCGAGTACGCC--GGCAAGCTGGGCGTCAATGTCGACGACCTGCTGGTCTCGCAGCCGG 146
Query 66708 ATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGT------CAAGTCTGGCGAGC 66761
| ||||| |||||||||||||| ||| ||| | || || ||| | | |||
Sbjct 147 ACACCGGTGAGCAGGCCCTGGAAATCACCGACATGCTGGTGCGCTCCAACGCCGTCGACG 206
Query 66762 TGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCG 66821
|| |||||||| ||||||||||||||||||| || |||||| |||||||||
Sbjct 207 TGATCATCGTCG------ACTCCGTGGCGGCCCTGGTACCCAAGGCCGAGATCGAAGGCG 260
Query 66822 ACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGCAAGC 66881
| || || |||| ||||| |||||||| || ||||| ||||| ||||| ||||||||
Sbjct 261 AAATGGGCGACATGCACGTGGGCCTGCAGGCTCGCCTGATGTCCCAGGCACTGCGCAAGA 320
Query 66882 TCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGA 66941
|||| |||| |||| | | ||||| ||| | ||| |||||||| | ||| ||
Sbjct 321 TCACCGGCAACATCAAGAACGCCAACTGCCTGGTGATCTTCATCAACCAGATCCGCATGA 380
Query 66942 AGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGC 66993
| |||||| || | | ||||| || |||||||| || || || ||
Sbjct 381 AAATCGGCGTGATGTTCGGCAGCCCG---GAAACCACCACCGGTGGTAACGC 429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242838571406340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |