Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_028957.1 Length=171541 Score E Sequences producing significant alignments: (Bits) Value seq2257 134 2e-26 >seq2257 Length=8409 Score = 134 bits (148), Expect = 2e-26 Identities = 298/438 (68%), Gaps = 12/438 (3%) Strand=Plus/Minus Query 142847 CTGGACGCCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTGTTCTTCAG 142906 ||| || || ||||||| || | || ||||||||||| || || |||||||||||| Sbjct 5877 CTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTCTTCAG 5818 Query 142907 AACGAGCAAATTTTCAACTTCCAAATGCCATAAAGG--ATAATAAGCAGTAGCAGCGCCG 142964 ||| |||| |||| ||||||| ||||| | || | || ||| || || || || Sbjct 5817 AACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAG--GTTGCCGCACCA 5760 Query 142965 CCCCGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGA 143024 || || | || ||||| || ||||| || || || | ||||| || ||||||| Sbjct 5759 CCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAACGGC 5700 Query 143025 ATAACACCAGTATGACGAACTTCACCCATACCGATTTTCG-AACCTTCAGCACGAATCAT 143083 | ||| || || | ||||| ||| ||| ||||| ||| | || ||||| Sbjct 5699 AGGCAACCCGTGTGTTGTGCTTCA-CCACCACGAATTTCGCTGCCTACGGCGCGAATGCG 5641 Query 143084 ACCAACGTTGATGCCGATACCCGCACGCTTACTGATA--TATTCGATGATTGAATTGGCA 143141 ||| | ||||| |||||||| ||||||| ||| | || | || | ||| Sbjct 5640 GCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATGGCGCTGGTC 5583 Query 143142 GTCTTATTGATTGACTTCAGGGAGTCTGCAGCTTCGATAACCACGCAGGAACTGAACTGC 143201 || |||||| | |||| ||| || |||||| | |||||| || |||||||| Sbjct 5582 GTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTGG 5523 Query 143202 CGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGAAA-CCTGTCTTGTGGA 143260 || || ||||| | |||| |||||||| || |||||||| |||| | || ||| || Sbjct 5522 CGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCTTGAATTG-CGA 5464 Query 143261 TACTGCATCATAAAAACG 143278 ||| || || ||||| || Sbjct 5463 TACGGCGTCGTAAAAGCG 5446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548751681099600