Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq1179 91.5 3e-13 >seq1179 Length=465 Score = 91.5 bits (100), Expect = 3e-13 Identities = 204/301 (68%), Gaps = 4/301 (1%) Strand=Plus/Minus Query 234549 CATCATCCCACCGCACGGCTTTATCCTGACTCGTTCTGTGGAGTACGTCCGTATTCCGCG 234608 ||||||||| || || ||| |||| | || | || |||||| |||| || ||||| Sbjct 401 CATCATCCCGCCCAACTCCTTCGCCCTGGCGCGCACCGTCGAGTACTTCCGCATCCCGCG 342 Query 234609 TAACGTACTGGCACTGTGCATCGGTAAGTCGAC-TATCGCCCGTGTGGGCATCAACTGTC 234667 ||||| ||| | | ||| | || ||| || ||| |||||| ||||||| | ||| Sbjct 341 CAACGTGCTGACCATCTGCCTGGGCAAGAGCACCTAT-GCCCGTTGCGGCATCATC-GTC 284 Query 234668 TGTG-CACTCCGATCGAACCGGAATGGGAAGGCCACATCACCTTCGAATTCCACAACACT 234726 | ||| ||| |||| ||||| |||||||||||| | ||| | || ||| |||||| Sbjct 283 AACGTCACCCCGCTCGAGCCGGAGTGGGAAGGCCACGTGACCCTGGAGTTCTCCAACACC 224 Query 234727 CTCGATCAACCGAACACCTTCTATGCCAACGAAGGTGTACTGCAACTGGTCTTCATCGAA 234786 | | ||| || |||| ||||||||||| || ||| || | ||| | || Sbjct 223 ACCACCCTGCCGGCCAAGATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCCTGGAG 164 Query 234787 GGCGATGAGCCGTGCATTACTTCGTATGCCGATCGTGGCGGTAAGTACCAGGGTCAGGGC 234846 ||| || |||| || ||| || || ||||| ||||||||||| ||| || Sbjct 163 TCCGACGAAGAGTGCGAAGTGTCCTATAAGGACCGCGGCGGCAAGTACCAGGGCCAGCGC 104 Query 234847 G 234847 | Sbjct 103 G 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989239204389030