Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_028999.1
Length=309208
Score E
Sequences producing significant alignments: (Bits) Value
seq1179 91.5 3e-13
>seq1179
Length=465
Score = 91.5 bits (100), Expect = 3e-13
Identities = 204/301 (68%), Gaps = 4/301 (1%)
Strand=Plus/Minus
Query 234549 CATCATCCCACCGCACGGCTTTATCCTGACTCGTTCTGTGGAGTACGTCCGTATTCCGCG 234608
||||||||| || || ||| |||| | || | || |||||| |||| || |||||
Sbjct 401 CATCATCCCGCCCAACTCCTTCGCCCTGGCGCGCACCGTCGAGTACTTCCGCATCCCGCG 342
Query 234609 TAACGTACTGGCACTGTGCATCGGTAAGTCGAC-TATCGCCCGTGTGGGCATCAACTGTC 234667
||||| ||| | | ||| | || ||| || ||| |||||| ||||||| | |||
Sbjct 341 CAACGTGCTGACCATCTGCCTGGGCAAGAGCACCTAT-GCCCGTTGCGGCATCATC-GTC 284
Query 234668 TGTG-CACTCCGATCGAACCGGAATGGGAAGGCCACATCACCTTCGAATTCCACAACACT 234726
| ||| ||| |||| ||||| |||||||||||| | ||| | || ||| ||||||
Sbjct 283 AACGTCACCCCGCTCGAGCCGGAGTGGGAAGGCCACGTGACCCTGGAGTTCTCCAACACC 224
Query 234727 CTCGATCAACCGAACACCTTCTATGCCAACGAAGGTGTACTGCAACTGGTCTTCATCGAA 234786
| | ||| || |||| ||||||||||| || ||| || | ||| | ||
Sbjct 223 ACCACCCTGCCGGCCAAGATCTACGCCAACGAAGGCGTGGCGCAGATGCTGTTCCTGGAG 164
Query 234787 GGCGATGAGCCGTGCATTACTTCGTATGCCGATCGTGGCGGTAAGTACCAGGGTCAGGGC 234846
||| || |||| || ||| || || ||||| ||||||||||| ||| ||
Sbjct 163 TCCGACGAAGAGTGCGAAGTGTCCTATAAGGACCGCGGCGGCAAGTACCAGGGCCAGCGC 104
Query 234847 G 234847
|
Sbjct 103 G 103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989239204389030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |