Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq2257 201 1e-46 >seq2257 Length=8409 Score = 201 bits (222), Expect = 1e-46 Identities = 309/438 (71%), Gaps = 2/438 (0%) Strand=Plus/Minus Query 77157 TTGATTAAACGCTTATACATCAAATCGTTAAGCTGAACGCCATAATCCAGGTGACGAATA 77216 ||||| | |||| |||| ||| ||| | |||||| || || |||| |||||||||| Sbjct 5909 TTGATCAGGCGCTGGTACAGCAAGCGGTTGATCTGAACACCGTAGTCCAAGTGACGAATA 5850 Query 77217 CGGTTATTCTCAACACCTTTGTTGTTTTTCAGAACCAGCAGGTTTTCAACTTCCAAATGC 77276 ||||| | || ||||| |||||| |||||||||||||| |||| ||||||| ||| Sbjct 5849 CGGTTTTCTTCCACACCACGGTTGTTCTTCAGAACCAGCAGTGTTTCCACTTCCAGGTGC 5790 Query 77277 CAGATCGGATAATACAACGTTGCAGCACCACCACGAACGCCACCTTGTGAACAGGATTTA 77336 || || || || |||| ||||| ||||||||||| ||||| ||||| || ||||| || Sbjct 5789 CACATGGGGTAGAACAAGGTTGCCGCACCACCACGCACGCCGCCTTGCGAGCAGGACTTC 5730 Query 77337 ACCGCTGTCTG-AATATGTTTCCAGAACGGGATCACGCCTGTATGTACTGCTTCACCACC 77395 ||||| | ||| || || || ||||||| | || || ||| |||||||||||| Sbjct 5729 ACCGCAGCCTGGAACATCTTGA-AGAACGGCAGGCAACCCGTGTGTTGTGCTTCACCACC 5671 Query 77396 ACGGATTTTAGAACCCATTGCGCGAATGTGTCCAGCATTAACACCGATACCCGCGCGTTG 77455 ||| |||| || | ||||||||| | ||| |||| | ||||||||| || || || Sbjct 5670 ACGAATTTCGCTGCCTACGGCGCGAATGCGGCCACCATTGATACCGATACCGGCACGCTG 5611 Query 77456 TGAAATATACTTCACGATCGCAGAGGTTACAGCATTCAGAGAACCCAGTGAATCACCTGA 77515 ||| | || || || || ||| ||||| | |||| || | | Sbjct 5610 TGACACGTAACGAACAATGGCGCTGGTCGTGGCATTGATGCTGTCCAGGCTGTCGTCACA 5551 Query 77516 TTCAATCACTACGCAACTGGAAAACTGACGCGTAGGAGTACGCACACCCGCCATAATAGG 77575 ||| |||| |||||| | ||||| || || || || ||||| || ||||| || || Sbjct 5550 TTCGATCAGCACGCAAGAGCTGAACTGGCGAGTGGGTGTGCGCACGCCAGCCATGATGGG 5491 Query 77576 CGTAGGTAACGACAGCTT 77593 ||| || || || | ||| Sbjct 5490 CGTGGGCAAGGAAATCTT 5473 Score = 102 bits (112), Expect = 9e-17 Identities = 194/283 (69%), Gaps = 2/283 (1%) Strand=Plus/Minus Query 75554 GTGAATTGTTTCACTGAAAGCCCATGTTTCGATCCACGTTTCCAT-TGAAACATCAGAGG 75612 |||||| || || ||||||||| ||||| ||||| ||||||| | ||| || Sbjct 7515 GTGAATCGTCTCGGAGAAAGCCCAGGTTTCAATCCAGGTTTCCAGCTCCGGAATC-GATA 7457 Query 75613 CAATCGGGAGAAACGCCAGGTTAGGGCCGCGTCCCTGAATGGTATCTAACAGGGTTTGAT 75672 | | || || || |||| ||| |||| ||| ||||| |||| ||| | || ||| |||| Sbjct 7456 CCAAAGGCAGGAAGGCCACGTTGGGGCTGCGGCCCTGGATGGAATCCAGCAAGGTCTGAT 7397 Query 75673 ATTGCAGGTTAGAATCAAAAATGATTTTTTCGTGTTCCGGCATTTTTGCATACTGCATAC 75732 | | ||| || |||||| |||||||| || |||| || ||| | || | Sbjct 7396 ACTTCAGATTGCTGATGAAAATGTGCTTTTCGTGGTCAGGCAGGTTCTGATAGTCGATCC 7337 Query 75733 GGTCTATCGACAGATCCACTTCTTCCGGTCGCCAGAAGAATGACAGTTGTTTTTCAGTCA 75792 |||| | | |||||||| ||||| ||||||||||| |||| || |||||| ||| Sbjct 7336 GGTCCTGGGTAATGTCCACTTCCTCCGGACGCCAGAAGAAGGACAACTGCTTTTCAATCA 7277 Query 75793 AAGTTTCGAATACGCGATGTTTTTGTTCTTCATATCGGGCAAC 75835 |||| || | ||| |||||| | || || || || || Sbjct 7276 GCTTTTCAAAAATCGGATATTTTTGCTGGTCGTAGCGAGCCAC 7234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568420234540800