Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq2290 95.1 1e-14
seq6693 84.2 2e-11
>seq2290
Length=1989
Score = 95.1 bits (104), Expect = 1e-14
Identities = 111/150 (74%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| || ||||||| || ||||||||||| || || || ||||| ||||| || |
Sbjct 903 TGGGCCATCATGTGGGTCAGCAGAGCGTAGCTGGCGATATTGAAGGGCACACCCAGGAAA 962
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|| || | || || ||||||||||||||||||| |||| || || ||||| |||
Sbjct 963 ATATCCGCACTGCGCTGGTAGAGCTGGCAGGACAGCTTGCCATCGGCTACATAGAACTGG 1022
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATC 6769
| |||| |||||| ||||| || ||||||
Sbjct 1023 AACAGGGCGTGGCAAGGGGGCAGAGCCATC 1052
Score = 95.1 bits (104), Expect = 1e-14
Identities = 111/150 (74%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTC 34635
|||||| || ||||| |||||| |||| | ||| ||||| || || |||| |||||||
Sbjct 1052 GATGGCTCTGCCCCCTTGCCACGCCCTGTTCCAGTTCTATGTAGCCGATGGCAAGCTGTC 993
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
|||||||||||| || || | || || | || ||||| ||||| || || ||
Sbjct 992 CTGCCAGCTCTACCAGCGCAGTGCGGATATTTTCCTGGGTGTGCCCTTCAATATCGCCAG 933
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||||||||| || ||||||| || ||
Sbjct 932 CTACGCTCTGCTGACCCACATGATGGCCCA 903
>seq6693
Length=129131
Score = 84.2 bits (92), Expect = 2e-11
Identities = 170/248 (69%), Gaps = 7/248 (3%)
Strand=Plus/Plus
Query 34181 GTGTTCGGCACACAGGCCCGATACAACCTTCGGGGCGAA---TTTCCGCTGCTGACGACG 34237
|||||||| | ||| | ||||| || || | || | || || || |||||||||
Sbjct 98311 GTGTTCGGAATGCAGTCGAGATACTCGCTGCGTGACGGAACCTTGCCACTTCTGACGACG 98370
Query 34238 AAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACG 34297
|| || || | ||||||||| | | |||||||| |||||||| | | || | ||||
Sbjct 98371 AAGCGGGTCTTCTGGAAGGGTATCCTGGAGGAGCTCTTGTGGTTCATCCGTGGCGACACG 98430
Query 34298 AACACCAAGGAGCTCTCGTCCCG--GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAG 34355
|| | ||| | || | | || ||| || ||||||||||| | | || || || |
Sbjct 98431 AATGCAAAGCA-CT-TGAGCGCGAAGGGCGTCAAGATCTGGGAGCCGAATGGCTCGCGCG 98488
Query 34356 ACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACG 34415
||| || ||||| | || ||| | || |||||||||| |||| ||||| || |
Sbjct 98489 CCTTCCTCGACAACCTCGGATTCACCGAACGCCAGGAGGGCGATCTGGGGCCGGTTTATG 98548
Query 34416 GGTTCCAG 34423
| ||||||
Sbjct 98549 GCTTCCAG 98556
Score = 84.2 bits (92), Expect = 2e-11
Identities = 170/248 (69%), Gaps = 7/248 (3%)
Strand=Plus/Minus
Query 6922 CTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTC 6981
|||||| || || ||||| |||| |||||||||| || | ||| || | |||||
Sbjct 98556 CTGGAAGCCATAAACCGGCCCCAGATCGCCCTCCTGGCGTTCGGTGAATCCGAGGTTGTC 98497
Query 6982 CAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC--CGGGACGAGAGCTCC 7039
|| ||| | || || || | | ||||||||||| || ||| || | | || | |
Sbjct 98496 GAGGAAGGCGCGCGAGCCATTCGGCTCCCAGATCTTGACGCCCTTCGCGCTCA-AG-TGC 98439
Query 7040 TTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTAC 7099
|| | |||||| | || | | |||||||| |||||||| | | ||||||||| |
Sbjct 98438 TTTGCATTCGTGTCGCCACGGATGAACCACAAGAGCTCCTCCAGGATACCCTTCCAGAAG 98379
Query 7100 ACACGTTTCGTCGTCAGCAGCGGAAA---TTCGCCCCGAAGGTTGTATCGGGCCTGTGTG 7156
|| || ||||||||||| || || || | || | || || ||||| | ||| |
Sbjct 98378 ACCCGCTTCGTCGTCAGAAGTGGCAAGGTTCCGTCACGCAGCGAGTATCTCGACTGCATT 98319
Query 7157 CCGAACAC 7164
||||||||
Sbjct 98318 CCGAACAC 98311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448220319367200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |