Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq4924 129 4e-25 seq2290 105 5e-18 >seq4924 Length=20857 Score = 129 bits (142), Expect = 4e-25 Identities = 138/182 (76%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 27187 TGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAG 27246 ||||||||||| || | || || || || || || ||||||| ||||||||| Sbjct 509 TGGACAAACTCACC----TTTAAGCCAGTCACATGCGCGATCATGTGAGTGAGGAGACCA 454 Query 27247 TAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGA 27306 |||||||||||||| ||||| || || || |||| || || || | |||||| || ||| Sbjct 453 TAGCTGGCGATGTTGAAGGGCACTCCAAGGGCCATATCGCCGGAACGCTGGTATAGTTGA 394 Query 27307 CACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCC 27366 ||||| || || || |||||||| || |||||||| |||| |||||||| || | ||| Sbjct 393 CACGACAGTTCCCCGTCGCTTACATAGAACTGACACATGGTATGGCACGGTGGCAATGCC 334 Query 27367 AT 27368 || Sbjct 333 AT 332 >seq2290 Length=1989 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27220 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 27279 || |||||||||| || || |||| |||||||||||| || ||||| || || || Sbjct 903 TGGGCCATCATGTGGGTCAGCAGAGCGTAGCTGGCGATATTGAAGGGCACACCCAGGAAA 962 Query 27280 ATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGA 27339 || ||| | | |||||||||||| || || |||| |||||| ||| || ||||| Sbjct 963 ATATCCGCACTGCGCTGGTAGAGCTGGCAGGACAGCTTGCCATCGGCTACATAGAACTGG 1022 Query 27340 CATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCAC 27399 | | ||||||||| || || |||||||| |||||| || ||||||||| | Sbjct 1023 AACAGGGCGTGGCAAGGGGGCAGAGCCATCTGGCCCACATCCGCCACGTTCCAGGCCGAG 1082 Query 27400 ACGATGATGCG 27410 ||||| | ||| Sbjct 1083 ACGATCAGGCG 1093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369473379698810