Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq4924 129 4e-25
seq2290 105 5e-18
>seq4924
Length=20857
Score = 129 bits (142), Expect = 4e-25
Identities = 138/182 (76%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 27187 TGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAG 27246
||||||||||| || | || || || || || || ||||||| |||||||||
Sbjct 509 TGGACAAACTCACC----TTTAAGCCAGTCACATGCGCGATCATGTGAGTGAGGAGACCA 454
Query 27247 TAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGA 27306
|||||||||||||| ||||| || || || |||| || || || | |||||| || |||
Sbjct 453 TAGCTGGCGATGTTGAAGGGCACTCCAAGGGCCATATCGCCGGAACGCTGGTATAGTTGA 394
Query 27307 CACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCC 27366
||||| || || || |||||||| || |||||||| |||| |||||||| || | |||
Sbjct 393 CACGACAGTTCCCCGTCGCTTACATAGAACTGACACATGGTATGGCACGGTGGCAATGCC 334
Query 27367 AT 27368
||
Sbjct 333 AT 332
>seq2290
Length=1989
Score = 105 bits (116), Expect = 5e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 27220 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 27279
|| |||||||||| || || |||| |||||||||||| || ||||| || || ||
Sbjct 903 TGGGCCATCATGTGGGTCAGCAGAGCGTAGCTGGCGATATTGAAGGGCACACCCAGGAAA 962
Query 27280 ATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGA 27339
|| ||| | | |||||||||||| || || |||| |||||| ||| || |||||
Sbjct 963 ATATCCGCACTGCGCTGGTAGAGCTGGCAGGACAGCTTGCCATCGGCTACATAGAACTGG 1022
Query 27340 CATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCAC 27399
| | ||||||||| || || |||||||| |||||| || ||||||||| |
Sbjct 1023 AACAGGGCGTGGCAAGGGGGCAGAGCCATCTGGCCCACATCCGCCACGTTCCAGGCCGAG 1082
Query 27400 ACGATGATGCG 27410
||||| | |||
Sbjct 1083 ACGATCAGGCG 1093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369473379698810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |