Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_030909.1
Length=50183
Score E
Sequences producing significant alignments: (Bits) Value
seq4015 215 2e-51
>seq4015
Length=3327
Score = 215 bits (238), Expect = 2e-51
Identities = 211/270 (78%), Gaps = 4/270 (1%)
Strand=Plus/Plus
Query 33921 GCCCGGAGCGAGCTGCTCGAATCGCGAGTACTTACCCAGGAACGCGCACCGGACAGTGCT 33980
|||||| || || | |||||| |||| |||||| || | |||||| || || ||
Sbjct 1107 GCCCGGTGCCAGGTTCTCGAAGCGCGTGTACTTGCCGATGAACGCCAGGCGCACGAAGCC 1166
Query 33981 --TGGCTCGCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTG 34038
||| |||||| || ||||| ||||||| | ||| || | ||| || || |||
Sbjct 1167 GATGGG--GCCGTTACGCTGCTTGCCGATGATGATCTCGGCGATGCCCTTGTGCTCGGTC 1224
Query 34039 TCCGGGTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATC 34098
|| ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1225 TCGGGGTGGTACACCTCGTCGCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATC 1284
Query 34099 GCCCCGGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAG 34158
|| || || || |||| ||| || ||| ||| |||||||| || |||||||| ||||||
Sbjct 1285 GCACCCGATTCACGCAAGTCGGAGTTCACCGGGCGCTTGTTGGGGCGCTGCTCGAGGGAG 1344
Query 34159 CGGTTGAGCTGCGACAGCACGATCACGGGG 34188
||||||||||||||||| |||| || |||
Sbjct 1345 CGGTTGAGCTGCGACAGGGCGATGACCGGG 1374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160449689619900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |