Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031030.1 Length=170788 Score E Sequences producing significant alignments: (Bits) Value seq2257 87.8 2e-12 >seq2257 Length=8409 Score = 87.8 bits (96), Expect = 2e-12 Identities = 266/407 (65%), Gaps = 8/407 (2%) Strand=Plus/Minus Query 139482 TGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 139541 |||||||| || |||| |||||||| ||||||||||| || || ||| || |||| | Sbjct 5876 TGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTCTTCAGA 5817 Query 139542 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGG--ATAATAAGCAGTAGCAGCGCCGC 139599 || || || |||| ||||||| ||||| || || | || ||| || || || || | Sbjct 5816 ACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAG--GTTGCCGCACCAC 5759 Query 139600 CACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAA 139659 |||| | || || || || || || || || |||| ||| || || | || || | Sbjct 5758 CACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAACGGCA 5699 Query 139660 TAACACCAGTATGACGTACTTCACCCATGCCAATTTTAGAACCTTCAGCACGAATCATAC 139719 ||| || || || ||||||| | ||||| ||| | || ||||| | Sbjct 5698 GGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATGCGGC 5639 Query 139720 CAACATTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCGGAAGCCT 139779 || |||| ||||| || || || || | || | || |||||| | || | Sbjct 5638 CACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTGGTCGTGG 5579 Query 139780 TATTGATAGACTTCAATGAATCTCCTGCC--TCAATAACGACGCATGAACTAAACTGCCG 139837 |||||| | || | | || | | || || | ||||| || || ||||| || Sbjct 5578 CATTGATGCTGTCCA--GGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTGGCG 5521 Query 139838 AGTTGGAGTACGACAGCCAGCCATAATAGGAGTTGGTAATGAAATCT 139884 ||| || || || ||||||||| || || || || || ||||||| Sbjct 5520 AGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCT 5474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546342307300800