Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_031030.1
Length=170788
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 87.8 2e-12
>seq2257
Length=8409
Score = 87.8 bits (96), Expect = 2e-12
Identities = 266/407 (65%), Gaps = 8/407 (2%)
Strand=Plus/Minus
Query 139482 TGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 139541
|||||||| || |||| |||||||| ||||||||||| || || ||| || |||| |
Sbjct 5876 TGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTCTTCAGA 5817
Query 139542 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGG--ATAATAAGCAGTAGCAGCGCCGC 139599
|| || || |||| ||||||| ||||| || || | || ||| || || || || |
Sbjct 5816 ACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAG--GTTGCCGCACCAC 5759
Query 139600 CACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAA 139659
|||| | || || || || || || || || |||| ||| || || | || || |
Sbjct 5758 CACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAACGGCA 5699
Query 139660 TAACACCAGTATGACGTACTTCACCCATGCCAATTTTAGAACCTTCAGCACGAATCATAC 139719
||| || || || ||||||| | ||||| ||| | || ||||| |
Sbjct 5698 GGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATGCGGC 5639
Query 139720 CAACATTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCGGAAGCCT 139779
|| |||| ||||| || || || || | || | || |||||| | || |
Sbjct 5638 CACCATTGATACCGATACCGGCACGCTGTGACACGTAACGAACAATGGCGCTGGTCGTGG 5579
Query 139780 TATTGATAGACTTCAATGAATCTCCTGCC--TCAATAACGACGCATGAACTAAACTGCCG 139837
|||||| | || | | || | | || || | ||||| || || ||||| ||
Sbjct 5578 CATTGATGCTGTCCA--GGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACTGGCG 5521
Query 139838 AGTTGGAGTACGACAGCCAGCCATAATAGGAGTTGGTAATGAAATCT 139884
||| || || || ||||||||| || || || || || |||||||
Sbjct 5520 AGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCT 5474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546342307300800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |