Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2592 91.5 2e-13 >seq2592 Length=18905 Score = 91.5 bits (100), Expect = 2e-13 Identities = 135/191 (71%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAA 48254 ||||| |||||||| || || || || |||||||| || || || ||||| ||||| || Sbjct 15102 GTGAGGCCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGCGGCGAAGGATCCGGAG 15161 Query 48255 AAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTG 48314 ||||| |||||||| ||||| || || ||| | | | |||| | ||| | ||| Sbjct 15162 AAGAAGATGCCTTCCACGGCGGCGAAGGCGATCACGCGGGTTCCGAAGGAGGCGTTCTTG 15221 Query 48315 TGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATA 48371 | ||||| || ||||||| || ||||||||||| | || || | || ||| Sbjct 15222 TCGCCGATCCAGCGCAGTGCCCAGTCGGCCTTCTTCTTGATGCACGGGAACTCTTGTATG 15281 Query 48372 GCATTAAAGAG 48382 || || ||||| Sbjct 15282 GCGTTGAAGAG 15292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694603587966400