Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24]
7,510 sequences; 92,836,338 total letters
Query= NC_031047.1
Length=170770
Score E
Sequences producing significant alignments: (Bits) Value
seq2257 84.2 2e-11
>seq2257
Length=8409
Score = 84.2 bits (92), Expect = 2e-11
Identities = 267/409 (65%), Gaps = 10/409 (2%)
Strand=Plus/Plus
Query 151992 AGATTTCATTGCCAACTCCTATTATGGCTGGTTGTCGTACTCCTACTCGACAGTTCAGTT 152051
||||||| ||||| || || || |||||||| || || || ||||| |||||||| |
Sbjct 5474 AGATTTCCTTGCCCACGCCCATCATGGCTGGCGTGCGCACACCCACTCGCCAGTTCAGCT 5533
Query 152052 CATGCGTTGTTATTGAGGCAGGAGATTCGCTGAAGTCTATCAAT---AAGGCTTCTGCTT 152108
| ||||| | || || | || ||| | |||||| | | | | ||
Sbjct 5534 CTTGCGTGCTGATCGAATGTGACGACAGCCTGGACAGCATCAATGCCACGAC--CAGCGC 5591
Query 152109 CAATTGTTGAATATATCTCCAAACGAGCTGGAATCGGCATTAACGTTGGTATGATTCGTG 152168
|| ||||| || | || | || || || ||||| || || | ||| ||||| |
Sbjct 5592 CA-TTGTTCGTTACGTGTCACAGCGTGCCGGTATCGGTATCAATGGTGGCCGCATTCGCG 5650
Query 152169 CCGAAGGTTCTAAGATTGGCATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGA 152228
||| ||| | ||| | ||||||| || || || ||| | || || | |
Sbjct 5651 CCGTAGGCAGCGAAATTCGTGGTGGTGAAGCACAACACACGGGTTGCCTGCCGTTCTTCA 5710
Query 152229 AACATTTTCAGACTGCTGTTAAATCATGCTCACAGGGTGGAATTCGTGGCGGCGCTGCTA 152288
| || ||| |||| || || || ||||| || || || | ||||| || || || |
Sbjct 5711 AGATGTTCCAGGCTGCGGTGAAGTCCTGCTCGCAAGGCGGCGTGCGTGGTGGTGCGGCAA 5770
Query 152289 CTGCTTATTAT--CCTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAA 152346
| ||| || | || || ||||| ||||||| |||| || || ||| |||| || ||
Sbjct 5771 C--CTTGTTCTACCCCATGTGGCACCTGGAAGTGGAAACACTGCTGGTTCTGAAGAACAA 5828
Query 152347 CAAAGGCGTAGAAGAAAACCGCATCCGTCATATGGATTATAGTGTTCAG 152395
| || || ||||||||||| || ||||| |||| || ||||||||
Sbjct 5829 CCGTGGTGTGGAAGAAAACCGTATTCGTCACTTGGACTACGGTGTTCAG 5877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546284712708000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |