Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq5432 95.1 3e-15 >seq5432 Length=1936 Score = 95.1 bits (104), Expect = 3e-15 Identities = 198/294 (67%), Gaps = 11/294 (4%) Strand=Plus/Plus Query 26908 GCCATTCATGCCCACGTTGATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCA 26967 ||| | |||| | ||| |||| || |||||||| |||| | ||| | || || ||| Sbjct 176 GCCCTGCATGTCGACGATGATCTCGGTGGTGTAACGCTTGATGCCGTCCTTTTC---CCA 232 Query 26968 TTTACGGGTTCGCAGACCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACC 27027 | ||||| |||| ||| || ||| |||||| || ||||||||||| || || Sbjct 233 CTCGCGGGTCTGCAGCTTGCCCTCGATGTACACCTGCGAACCCTTGCGCAGGTACTCGCC 292 Query 27028 AGCGATTTCCGCCAGCTTGCCGAAGATGACAACGCGGTGCCATTCCGTCTGCT----CTT 27083 || || || || | ||||||||| || ||| |||||||| || || ||| ||| Sbjct 293 GGCAATCTCGGCAACCTTGCCGAACATCGAAACACGGTGCCACTCGGTACGCTCGACCTT 352 Query 27084 TTGGTTCGCCTGTGGCCTTATCTTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAA 27143 || ||| || ||| || |||||| ||| | ||||| | |||||| |||| | Sbjct 353 CTG----GCCGGTCTGCTTGTCGGTCCACTGCTCGCTGGTGGCCAGGCTGAGGTTGGTCA 408 Query 27144 CTGCGCCACCTGACGGCATGTAGCGCACTTCTGGATCGTTGCCTAAATTACCGA 27197 | ||| || |||| || ||| ||||| || || | ||| || | |||| Sbjct 409 CCGCGTTGCCGTTGGGCAGGTGGCGAACTTCAGGGTCCTGGCCGCAAGTGCCGA 462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134004048285600