Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq6232 100 1e-16 >seq6232 Length=54526 Score = 100 bits (110), Expect = 1e-16 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 31088 GTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACATGTCCGCCAGGCGGGACAGCTTG 31147 ||||| || ||||| || || || ||||| || |||| || | | ||||| ||||||| Sbjct 29408 GTGAGACGCTCCTGGACCTGGAGACGGCGCGCGAACATCTCGACGACGCGGGCCAGCTTG 29467 Query 31148 CTCAGGCCCACGATACGACCGTTCGGAATGTAGCTGATCGTG-ACCGTGCCGAAGATCGG 31206 |||| ||| | ||| ||| || | ||||| ||| ||| ||| |||||| || || Sbjct 29468 CTCAAGCCGAGGATCTTCTTGTTGGGCAAGTAGCCGAT-GTGCACCTTGCCGATGAAAGG 29526 Query 31207 CGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGTCGCGCACCGTCACCATCTGGTC 31266 | ||||||||||||| || | ||| ||| |||||||||||| ||||||| ||| Sbjct 29527 CACGAGGTGATGCTCACAGAGGGAGAAGAACTCGATGTCGCGCACAACGACCATCTCGTC 29586 Query 31267 ATGCTTCTC 31275 || | ||| Sbjct 29587 GTGGTCCTC 29595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187272897279360