Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20glaseri_20[genbank_20GCA_5F000757755.1_202014-09-24] 7,510 sequences; 92,836,338 total letters Query= NC_031065.1 Length=159878 Score E Sequences producing significant alignments: (Bits) Value seq2257 136 4e-27 >seq2257 Length=8409 Score = 136 bits (150), Expect = 4e-27 Identities = 297/440 (68%), Gaps = 6/440 (1%) Strand=Plus/Minus Query 132583 TTGATTTGCAGACCATAATCTAGATGACGAATACGGTTTTCATCTACACCTTTGTTGTTC 132642 ||||| || | ||| || || | ||||||||||||||||| || ||||| ||||||| Sbjct 5882 TTGATCTGAACACCGTAGTCCAAGTGACGAATACGGTTTTCTTCCACACCACGGTTGTTC 5823 Query 132643 TTTAATACAAGCAGGTTTTCAACTTCTAGATGCCACATTGGATAATAAAGAGTAGCTGCA 132702 || | || ||||| |||| ||||| || |||||||| || || | | || || ||| Sbjct 5822 TTCAGAACCAGCAGTGTTTCCACTTCCAGGTGCCACATGGGGTAGAACAAGGTTGCCGCA 5763 Query 132703 CCACCACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAAAAA 132762 |||||||| || |||||||| || || || || || |||| ||| || || | || Sbjct 5762 CCACCACGCACGCCGCCTTGCGAGCAGGACTTCACCGCAGCCTGGAACATCTTGAAGAAC 5703 Query 132763 GGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATC 132822 || | || || |||| | |||| ||| || ||||| |||| | || ||||| Sbjct 5702 GGCAGGCAACCCGTGTGTTGTGCTTCACCACCACGAATTTCGCTGCCTACGGCGCGAATG 5643 Query 132823 ATACCGGCGTTGATGCCTATACCAGCTCGCTTGCTGATA--TACTTAATAATACTGTTAC 132880 || | ||||| || ||||| || |||| ||| | || || ||| | | Sbjct 5642 CGGCCACCATTGATACCGATACCGGCACGCT--GTGACACGTAACGAACAATGGCGCTGG 5585 Query 132881 TTGCCGCATTAATAGAATTCAGTGAATCGCCAGCTTCGATAACTACACAAGAACTAAATT 132940 | | ||||| || | ||| ||| || |||||| | || ||||| || || | Sbjct 5584 TCGTGGCATTGATGCTGTCCAGGCTGTCGTCACATTCGATCAGCACGCAAGAGCTGAACT 5525 Query 132941 GACGAGTAGGAGTACGAGCCCCCGCCATAATTGGTGTAGGTAATGAAATCTGTCGAGT-A 132999 | ||||| || || || | || ||||| || || || || || ||||||| | | | Sbjct 5524 GGCGAGTGGGTGTGCGCACGCCAGCCATGATGGGCGTGGGCAAGGAAATCT-TGAATTGC 5466 Query 133000 GATACAGCATCATAAAAGCG 133019 ||||| || || |||||||| Sbjct 5465 GATACGGCGTCGTAAAAGCG 5446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511433584664800